Gene Csal_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0188 
Symbol 
ID4026754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp210123 
End bp211127 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content61% 
IMG OID637965339 
Productperiplasmic solute binding protein 
Protein accessionYP_572251 
Protein GI92112323 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.494723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGTT TCAGTCCCTA CCTGGCGGTA CTACTCATGT CGCCGGCCGC CGCTTCCGCC 
GCTGTCCCTT CCGTCGCCGT CGATATCCCA TCAGTCTATT CGCTGGTCGA TCGCGTGATG
GGAGACCTGG GCGCCCCGAG CCTGCTGATC CAGCAGGGCG CCTCGCCCCA CCGTTACGAT
ATGCGTCCCT CCGAAGCCGA AGCGCTCGAG AACGCCGATG CCGTGTTCTG GATCGGCGAA
GACCTGACCC CGTGGCTGGC GCATTCCATG GACACCCTGG GTGACGACGC CCTCAGTGTC
GAACTGATGG ACTTGCCCGA GACGCAGACA CTCGCCTACC GGCAGGGCGC CACCTTCGAG
CCGCATCAGC ATGATCATGG GCCACACGAT CACGCCCATG GTCATGATCA CTCTCACAGC
CATGACCATG ACCATGACCA TGACCATGAC CATGACAGCC ATGATCATGA TCACTCCCAT
GAAGGACGAA ACCCTCATGT CTGGCTCGAT CCACAAAACG CCCAGGCCTG GCTGGACGTC
ATCGCCGACG ATCTCGCCCG CCTGGATCCA GCGCATGCAG ACACTTACCG GAACAACGCC
CGCCTCGGCA AAGACGAGCT GAACACCCTG ACTAAAGCGC TGCAGCAACA GCTCGCCAAT
GCCAGCTCCG CCAATTTCAT CGTCTTTCAC GATGCCTACC AGTATTTCGA ACACCGTTTT
GATGTCCATG CCGCCGGTGC CATCTCCCTG GGCGATGCGC GCAAGCCCAG CCCATCGCGC
ATCGCAGAGC TCCATACGCT CGTCGAAACG CATGACATCG ACTGCGTGTT CAGCGAGCCC
CAATACAACC CGGAACTCGT GAAAAGCGTC TTTGGCGATA CCGGCGTAAA CACGTCCATC
GTGGTCGATC CGCTGGGTAC CGATCTCGCG CTGGGGGACG ATCTTTACCC GAACTTGATG
CACAAGCTTG CCGATGCCGT CTCGCAGTGC GCGAGCGATG CCTGA
 
Protein sequence
MPRFSPYLAV LLMSPAAASA AVPSVAVDIP SVYSLVDRVM GDLGAPSLLI QQGASPHRYD 
MRPSEAEALE NADAVFWIGE DLTPWLAHSM DTLGDDALSV ELMDLPETQT LAYRQGATFE
PHQHDHGPHD HAHGHDHSHS HDHDHDHDHD HDSHDHDHSH EGRNPHVWLD PQNAQAWLDV
IADDLARLDP AHADTYRNNA RLGKDELNTL TKALQQQLAN ASSANFIVFH DAYQYFEHRF
DVHAAGAISL GDARKPSPSR IAELHTLVET HDIDCVFSEP QYNPELVKSV FGDTGVNTSI
VVDPLGTDLA LGDDLYPNLM HKLADAVSQC ASDA