Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4506 |
Symbol | |
ID | 4025517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007960 |
Strand | + |
Start bp | 153924 |
End bp | 155606 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637965011 |
Product | integrase catalytic subunit |
Protein accession | YP_571919 |
Protein GI | 92109632 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCAT CGGGTTCTGG CTGCGGCTCC CGCAGCGTGG CGATTGCGCG AGATGATGCC TGGGCGCAAG CGAAGCGCCA AGTGCGCGAA CTCGATCGGA TCCTTGATGG GCAAGGTCCG CGGCAGGTGT CGATCGCGCG GGCGGCGGCT GAGCTCGGAC TCACGACCCG GCATATCTAC AATCTGCTCA AGCGCTATGC GCCGGATCGG CGGATCACAG TGTTGCTGCC GCGGCGGGAC AGGCCGCGAG CCACGCGGCT GACGGCACCC GTCGAGGCGG TCATCGCAGA GGTTCTGCGC GAGCAGTGGC TGGTCAAGGA GGGGCCGGAA TTGCGTCCCT GCGTCGGCGA GATCCGGGCG CGGTGCTGTG AGGCCGGCGA GCGCCCGCCC TCTTATCGCG CGGTTCAGCG GCGCATTCCG ATGCTGTTCG AAGATCTCGC GATCGCCAAG GGCCGCTCCG CCAACCCCAG CCATGCGCGG CGATTGAAGG CGCGACCCGG CTATATTTCG GCGAGGGGTC TGCTCGATGT TGGCCAGATC GACCACACGC CGGCCGACAT CCAGTTCGTC GAGGTGATCG ACGGTGTCGG CGTCGTGGTC GGACGGCCCT ATCTCACTGT CGTAATCGAT GTCTTCTCGC GTGCCATTCT CGGGTTCTGC CTGACCCTGG AAAAGCCGAG TTCACTCTCG GTGGCGCTTT GCCTGCAACA GGCGCTGACG CCGAAGGCCC CATGGCTCGC GGCGCATGGT CTTGGCGAAC ACGACTGGCC GATGTCCGGC CGGCCACGCG TTCTGGTGGT CGATCGCGCC AAGGAGTTCA AGGGCCATGC TTTTGCCCGC GGCTGCGACG ATTTCGGGAT CACGATCCGC CCGCGGCACA AGGGGAACGT TCATCAGGGC GGCGTGATCG AGCGGCTGCT CGGCGCGCTC AATACGGTGC TGCGGACGCT GCCGGGCCAG ACCGGCCGCT CGGTCACGGA GCGCGACCAC TATCCCTCGG AGGCCCGCGC CCGGCTCAGC TTCGCCGATC TCGAACGCTG CGTCGCGCTC GCAGTGCTCG AGCACAACGC CAAACCGAAC GAGAAGACCT TGGACATTCC CGATCAGGTC TGGCGCGCCC ATGCCGCTGG CTTGCCGCCG CATCAAGACG ACCCCGACCA GGTGCTGATC GCCTTTCTTC CCGGCGGCGA TCGGCGGCTC ACGCCTCAAG GCGTCAGCGT GAATGCGATC GACTATTATG CCCCATGGCT GGGCGAACTC GTGCCGCGGC GCGACCGGGT CGGCAAACTC GCGATGCGCA CCGATCCGCG CGATCTGAGC CATATCTATC TGCGCCATCC CGACACCGGA GCCTTCCTGG CCGTTGAGCG GCGCGATGGC CGTACAGACG CAGTTACGCT GTGGGAGCAT GAGCACGCTC GCGCGATCAG GCGCGCGCTC GGCGGTGGAC CTGAATCCCG GATCGCGCTC CGGCGCGCGC TCCGGGCGAT CGCGGATGGC GCGATGCGCC CGGCCGTCGA ACCTGACACG CCAAAACCGG GCAAGCACGC GAGACGACAG GCGGCGCGGA CGGCGCTTGC GCATGCCGCA CCGAAACCGC ATCAGGCGCT GGCCTCACAA CCGGCGCGTT TTCCTGACCA CCCCGTGCGT GCGCGAAATC CACTGCCGGT CGAGGACTGG TGA
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Protein sequence | MAASGSGCGS RSVAIARDDA WAQAKRQVRE LDRILDGQGP RQVSIARAAA ELGLTTRHIY NLLKRYAPDR RITVLLPRRD RPRATRLTAP VEAVIAEVLR EQWLVKEGPE LRPCVGEIRA RCCEAGERPP SYRAVQRRIP MLFEDLAIAK GRSANPSHAR RLKARPGYIS ARGLLDVGQI DHTPADIQFV EVIDGVGVVV GRPYLTVVID VFSRAILGFC LTLEKPSSLS VALCLQQALT PKAPWLAAHG LGEHDWPMSG RPRVLVVDRA KEFKGHAFAR GCDDFGITIR PRHKGNVHQG GVIERLLGAL NTVLRTLPGQ TGRSVTERDH YPSEARARLS FADLERCVAL AVLEHNAKPN EKTLDIPDQV WRAHAAGLPP HQDDPDQVLI AFLPGGDRRL TPQGVSVNAI DYYAPWLGEL VPRRDRVGKL AMRTDPRDLS HIYLRHPDTG AFLAVERRDG RTDAVTLWEH EHARAIRRAL GGGPESRIAL RRALRAIADG AMRPAVEPDT PKPGKHARRQ AARTALAHAA PKPHQALASQ PARFPDHPVR ARNPLPVEDW
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