| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4288 |
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| Symbol | |
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| ID | 4025669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | - |
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| Start bp | 234966 |
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| End bp | 236609 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964816 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_571724 |
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| Protein GI | 92109436 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.167614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGC CCGACAATGA GGTCGATTGG CAGGTCGATT GGCAGGTGGC CTGCGAGCGG
GCCGCGATCC TGCGGCGAAC CTTCGCGGGC CCCGATGGCC GGTGCGAGCT CAGGCTCTCT
GAGGCGGCCC GCCTCCTCGG CGTCGACCGA ACCACGCTCT ACCGTTGGCG CAAGCGCCAT
GGTGTCGAGC ATCGCGCATC GGCCCTGATG CCGCGCGCCA AGGGCCGGCG GTCGGGCACG
CGGATTCTTC CGCGGTGCCT GGAGGAGCTG ATTGCGGGCG CCATCAAGAC CTTCTATCTG
ACCGCCGAGG CTCCGAGCCT TGCGGCGCTG GTGTGGCGCA TTCAGGGTCA GGCGCGTGAG
GCGGGCCTGC GCAAGCCGGC CTGGCGCACG GTGCGGCGCC GGGTCGAGGC CATCGATACA
AAAGAGCGCC TTCGCCGACG AGAGGGAGCC ACCGCCGCTT CGGCTCGTTG TGAGCCGGTC
GTCGCCAGTT TCGACGTCAG TGAACCGCTC GCCGTCGTCC AACTCGATCA TACGGTCGTC
GATGTCGTTG TTGTCGACGA GGTCGATCGC AAGCCGCTCG GCCGTCCGGT CGTGACTTTC
GCCATCGACG TGGCGACCCG CATGGTGACC GGGTTCTATC TTGGCTTCGA CGAACCGTCG
GTGCTGAGAG CGGGTGTCTG CCTCTCCCAA TCGGTGTTCG AGAAGGAAGC GTGGCTGGCG
GCGCGGGGCG TCGCCCTGAC CTGGCCGGTT TCCGGCTTGC CGCGCGCGGT TCATGTCGAC
AATGCCGGAG AATTCCATGC CAGCGCTTTC ACCCGCACGC TGCAGGATCA CGGCATTCAA
ATCATCTATC GGCCGATCGG CAAGCCGCGT TTCGGTGGCC ATGTGGAAAG GCTGATCGGA
ACGCAGATGG GCGCGGTGCA TCTTTTGCCC GGCACGACGT TCTCGAACAC GGTTGCGAAA
GGGGTTTATC CGTCTGAGCA ACGAGCCGTG ATGACGCTCA AGGAGCTCGA GCGCTGGATG
CTGCTTGAGA TCCTCGGGGT CTATCATCAG CGCATCCATG CCGGCTTGTC GCGACCGCCG
ATCGCGGTTT GGCAGGAGCG AACCCGCGGG TTGGCGCTGC CGGCGCCCAG GAACCGCATG
GCGTTCTTGG TCGGTCTGCT GCCGGCCGAG CGACGCATGG TTCGGCGCGA CGGGGTACGG
TTGTTCGGCA TCCGCTATTG GTCGGATGCG CTCGGCGACC TTCCCGGCCG CGGCCATCAA
CGGCTGGAAG TTCGCTATGA TCCCCGCGAC CTGTCGCTGA TCTATGTTCG CAGACCACAG
GGGCAGTTTG TCGAGGTGTC CTACCAAAAT CTCGGCCGGG CCTCGATCTC GCTCTGGGAA
CAGCGCCGGG CGGTCGGCCG CTTGCGGGCG CAAGGGCGCG CGGAGGTCGA CGAAACCCTG
ATCTTCGAGA CCATCGAGGC GCAACGGGTG CTTGAGGACG CGGCCCGGCG TGGCTCCAGG
GAAGCGCGCC GCCAGATCGT CCGCCGTCCT GCCCCGATCG CGCCGCCGCG AGACGAGCCT
CGCGGGATCG GCCCGATCGA CACCAATGAT GCTCGGTTGC GCCTGTTCGA CGTGGAGGTC
ATTCATGATA AGCATCGTCC CTAA
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| Protein sequence | MSEPDNEVDW QVDWQVACER AAILRRTFAG PDGRCELRLS EAARLLGVDR TTLYRWRKRH
GVEHRASALM PRAKGRRSGT RILPRCLEEL IAGAIKTFYL TAEAPSLAAL VWRIQGQARE
AGLRKPAWRT VRRRVEAIDT KERLRRREGA TAASARCEPV VASFDVSEPL AVVQLDHTVV
DVVVVDEVDR KPLGRPVVTF AIDVATRMVT GFYLGFDEPS VLRAGVCLSQ SVFEKEAWLA
ARGVALTWPV SGLPRAVHVD NAGEFHASAF TRTLQDHGIQ IIYRPIGKPR FGGHVERLIG
TQMGAVHLLP GTTFSNTVAK GVYPSEQRAV MTLKELERWM LLEILGVYHQ RIHAGLSRPP
IAVWQERTRG LALPAPRNRM AFLVGLLPAE RRMVRRDGVR LFGIRYWSDA LGDLPGRGHQ
RLEVRYDPRD LSLIYVRRPQ GQFVEVSYQN LGRASISLWE QRRAVGRLRA QGRAEVDETL
IFETIEAQRV LEDAARRGSR EARRQIVRRP APIAPPRDEP RGIGPIDTND ARLRLFDVEV
IHDKHRP
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