Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4397 |
Symbol | |
ID | 4024922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4864149 |
End bp | 4866614 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637964606 |
Product | hypothetical protein |
Protein accession | YP_571514 |
Protein GI | 91978855 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.256206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGCGCG CGCTGTGGAT CCTCGCGGTT CTGCTCAGCC ATTGGCGACG CCATCCGCTC CAACTCGCCA CGCTGCTGAT CGGCCTGATC TCGGCGACCG CGCTGTGGAG CGGCGTGCAG GCGCTGAATG CGCAGGCGCG CACGAGTTAC GACCGCGCCG CGGCGACGCT CGGCGGCGCC CGCACCGCAA CGCTGGTCGC GCCCGATGGC GACAGTTTCT CGCAGCAGAT GTTCGTCGAT CTGCGCCGCG CCGGCTGGCC GGTGTCGCCC GTCGTCGAGG GCCGCGTCCG GGTCGGCGAC CGCACGCTGC GGCTGCTCGG CATCGAGCCG CTGTCGCTGC CGGTCGAGGC CAGCGCCGCG CCCGCGATCG GCACCGCCAA TCTGCAGGGC TTCATTCTGC CGCCCGGCCA GACGCTGCTC TCGCCCGCAA CGCTTGCCGA GCTGAAACTG TCCGAGGGCG CGACGCCCGC GATCAGCAAC GGCGGCAAGC TGCCGCCGCT GAAGCCGCAA GCCGAACTCG CGCCGGGCGT GCTGGTCGTC GACATCGGCA TCGCGCAACC GCTGCTCGGG CTGAACGGCC AGGTGTCGCG GCTGCTGATC GGCAACAAGG CGGCAGCTAC GCGGACGCCG CTGCAGCAGA TCGTCGGCGA CAAGCTCAAA CAGGTCGAGC CCGACACCGA GACCGACCTC GAACGCCTGA CCGACAGCTT CCACCTCAAC CTCACCGCGT TCGGACTGCT CTCTTTTCTC GTCGGGCTGT TCATCGTCAA TTCGGCGATC GGGCTCGCCT TCGAACAACG CCGGCCGATG CTGCGGACGC TGCGCGCCTG CGGCGCCTCG GCGCGGCTGT TGAACAGCGT GATGGTGATC GAGCTGACGT TGATCGCTTT GTTGGCCGGG CTGATCGGCC TCGTCTGCGG CTATGTCATC GCCGCCACGC TGCTGCCCGA CGTCGCCGCC AGCTTGCGCG GATTATACGG CGCACAGATT CCCGGCGAAT TGTCCCTCCA GCCGCAATGG TGGCTGGCCG GGATCGCGAT CAGCATCCTC GGCGCACTGG CGGCGGCCTC CGCGAGCCTG ATCAAGGCGG CGCGGATGCC GGTGCTCGCC GCAGCGCAAG CCTTCGCCTG GCAACAGGCG CAGCAGCGCT GGCTGCTGAT TCAGGGCAGC GTCGCGCTCC TCGTGTTCGC CGCGGCAGGC GGCTTTCTGT GGTTCGGCGA TTCGCTGGTG TCGGGCTTTG CGGTGCTCGC CGCGATCCTG CTCGGCGCCG CGCTCGGTCT GCCGGCCGTG CTCGGCCTGG TGCTGGCGCT CGGCGAACGC GGCGCAAAAC ATCCGCTGAT GAAATGGTTC TGGGCCGACA ACCGGCTGCA GCTCTCCGGC CTGTCGCTGG CGTTGATGGC GCTGCTGCTG GCGCTCGGCG TCAATGTCGG CGTCGGCACC ATGGTCGAGA GCTTCAGCCG CACCTTCGAG CGCTGGCTCG ACGGAAGGCT CGCCGCCGAA GTCTATCTCA ACGCGGCAAA CGATACCCAG GCGACCGAGA TCAAGGCTTG GCTGAAGCAG CGGCCGGAAG TGACCGCGCT GCTGCCCGGC ACGCGCGCCG AGGTGAAACT CGACGGCTGG CCTGCCGAGG TCATCGGCTT CGCCGACGAT CCCACCTATC GGGACAACTG GCCGTTACTC GAGCAGACCA AGGATGTCTG GGACGCCGTC GCACGCGGGC AGGCCGCGCT GATCAGCGAG CAATTGTCGC GGCGGATGAA ACTCGCGCTC GGCGATCGCA TCGTCGTGCC GACCAGCAAC GGGCCGTGGC CGCTCACCGT CGCGGCGATC TACGCCGACT ATGGCAATCC ACGCGGCCAG ATCGGCGTCG CCTACGACGC AATGATCGCG CGCTTCCCCG ACGTCGCGCA GACCCGGCTC GGATTGCGCG TCGATCCGGC GCGCGCGCCG GCGCTGGTCG AGGACCTCCG CGCGCGCTTC AAGCTCGACA ATCGCAGCCT CGCCGATCAG GCGACGCTGA AGACCGAGTC CAAGCGGATC TTCAACCGCA CCTTCGCGGT GACCGCCGCA CTCAACGCCT TCACCCTGGG CATCGCCGGC ATCGCGCTGC TGACCAGCCT GCTCACGCTC GGCAATTCGC GACTGCCGCA GGTCGCACCC TTGTGGGCGA TCGGCATCAC CCGGCGAAAG CTCGCTTTCA TCGAGCTGAT GAAGACTCTG TCAATGGCCG CGCTCACCGC GGCGCTGGCG CTGCCGCTCG GGCTGATGGT GGCGTGGTGT CTGATCGCGG TGGTCAACGT CAAGGCGTTC GGCTGGCGGC TGCCTTTCGA GGTGTTTCCG TGGGAGCTGT TGAAGCTGCT CGGCGTCGCG CTGCTGGCGT CGCTGATCGC GGCAGCGTTG CCGATCCTGA AACTGGTGCG GATGCAGCCG GCGCGGCTGG TGAAGGTGTT CGCCGATGAG CGCTAG
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Protein sequence | MRRALWILAV LLSHWRRHPL QLATLLIGLI SATALWSGVQ ALNAQARTSY DRAAATLGGA RTATLVAPDG DSFSQQMFVD LRRAGWPVSP VVEGRVRVGD RTLRLLGIEP LSLPVEASAA PAIGTANLQG FILPPGQTLL SPATLAELKL SEGATPAISN GGKLPPLKPQ AELAPGVLVV DIGIAQPLLG LNGQVSRLLI GNKAAATRTP LQQIVGDKLK QVEPDTETDL ERLTDSFHLN LTAFGLLSFL VGLFIVNSAI GLAFEQRRPM LRTLRACGAS ARLLNSVMVI ELTLIALLAG LIGLVCGYVI AATLLPDVAA SLRGLYGAQI PGELSLQPQW WLAGIAISIL GALAAASASL IKAARMPVLA AAQAFAWQQA QQRWLLIQGS VALLVFAAAG GFLWFGDSLV SGFAVLAAIL LGAALGLPAV LGLVLALGER GAKHPLMKWF WADNRLQLSG LSLALMALLL ALGVNVGVGT MVESFSRTFE RWLDGRLAAE VYLNAANDTQ ATEIKAWLKQ RPEVTALLPG TRAEVKLDGW PAEVIGFADD PTYRDNWPLL EQTKDVWDAV ARGQAALISE QLSRRMKLAL GDRIVVPTSN GPWPLTVAAI YADYGNPRGQ IGVAYDAMIA RFPDVAQTRL GLRVDPARAP ALVEDLRARF KLDNRSLADQ ATLKTESKRI FNRTFAVTAA LNAFTLGIAG IALLTSLLTL GNSRLPQVAP LWAIGITRRK LAFIELMKTL SMAALTAALA LPLGLMVAWC LIAVVNVKAF GWRLPFEVFP WELLKLLGVA LLASLIAAAL PILKLVRMQP ARLVKVFADE R
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