| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4147 |
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| Symbol | tolB |
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| ID | 4024669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4618605 |
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| End bp | 4619954 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964355 |
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| Product | translocation protein TolB |
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| Protein accession | YP_571267 |
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| Protein GI | 91978608 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGCC CGAACATGCC GCTCAACTTG AATCGCAGAC AATTGATGCT CTCCGCAGCG
AGTGCGGCCG GCGCGCTCGC GCTCGGCCCG GCGCGTGACG CTTTCGGCCA GGCCCGCGTG
CAGATCACCG AGGGCAACGT CGCGCCGCTG CCGATCGCGA TCCCGAACTT CGTCGCCGGC
ACGCCGTCGG ACAATGAAGT CGGCGGCGGC GTCAGCCAGG TGATCACCAA CAACCTCAAG
CGTAGCGGGT TGTTCGCGCC GATCGATCAG GCCGCTTATC TCGAGAAGAT CACCAACATC
GACGTGCCGC CGCAGTTCAA GAGCTGGACC AGCATCAACG CCCAGGCGCT GGTCACCGGC
CGGATGACGC GGCAGCCGGA CGGCCGCCTC AAGGCCGAGT TCCGGCTGTG GGATGTCGCC
ACCGGCCAGC AGCTCGCGGG CCAGCAGTAT TTCACCTCGC CGGAATACTG GCGGCGCATC
GCCCACATCA TCTCCGACCA GATCTACGAA CGGCTCACCG GCGAGAAGGG ATACTTCGAC
AGCCGCGTGG TGTTCATCGA TGAAAGCGGC CCGGCGGACC GCCGCGTCAA GCGGCTGGCG
CTGATGGACC AGGACGGCGC CAATGTTCGC TATCTGACCC GCGGCAGCGA TCTGGTGCTG
ACGCCCCGGT TCTCGCCGTC GACCCAGGAA ATCACCTATA TGGAGTTCGG CCAGGGCGAC
CCGAAGGTCT ATCTGTTCAA CATCGAGACC GGGCAGCGCG AGATCGTCGG CAACTTCCCC
GGAATGTCGT TCGCGCCGCG GTTTTCGCCG GACGGTCAGC GCATCATCAT GAGCCTGCAG
CAGGGCGGCA ATTCCAATCT GTTCGTCATG GACCTGCGCT CGAAGACGAC GACACGGCTG
ACCGACACGC CGGCGATCGA CACCTCGCCG TCCTATTCGC CCGACGCAGC CCGGATCTGC
TTCGAGTCCG ACCGCGGCGG CAAGCCGCAG ATCTACATCA TGCCGGCGGG CGGCGGGCAG
GCGCAGCGCA TTTCCTTCGG CGACGGGAGC TATTCGACCC CGGTATGGTC GCCGCGCGGC
GACTACATCG CCTTCACTAA GCAGGGCGGC GGTCAGTTCG CGATCGGCAT CATGAAGCCC
GACGGCTCTG GCGAGCGAAT TCTGACCTCG GGCTTCCACA ATGAGGGGCC GACCTTCGCG
CCGAACGGCC GCGTGCTGAT GTTTTTCCGC GATCCGGGCG GGAACGCGGG GCCGTCGCTC
TATACGGTCG ACGTGTCGGG CCGCAACGAA TTGCGGGTTC CGACCCCGGG CTACGCGTCC
GACCCGGCCT GGTCGCCGCT GCTGTCATAG
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| Protein sequence | MDCPNMPLNL NRRQLMLSAA SAAGALALGP ARDAFGQARV QITEGNVAPL PIAIPNFVAG
TPSDNEVGGG VSQVITNNLK RSGLFAPIDQ AAYLEKITNI DVPPQFKSWT SINAQALVTG
RMTRQPDGRL KAEFRLWDVA TGQQLAGQQY FTSPEYWRRI AHIISDQIYE RLTGEKGYFD
SRVVFIDESG PADRRVKRLA LMDQDGANVR YLTRGSDLVL TPRFSPSTQE ITYMEFGQGD
PKVYLFNIET GQREIVGNFP GMSFAPRFSP DGQRIIMSLQ QGGNSNLFVM DLRSKTTTRL
TDTPAIDTSP SYSPDAARIC FESDRGGKPQ IYIMPAGGGQ AQRISFGDGS YSTPVWSPRG
DYIAFTKQGG GQFAIGIMKP DGSGERILTS GFHNEGPTFA PNGRVLMFFR DPGGNAGPSL
YTVDVSGRNE LRVPTPGYAS DPAWSPLLS
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