Gene RPD_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3653 
Symbol 
ID4024167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4077817 
End bp4078356 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content68% 
IMG OID637963857 
Producthypothetical protein 
Protein accessionYP_570777 
Protein GI91978118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA CTTCATGGCG TCGGCGCCTT GTCGACCGTT TCCCCGATCT CTTCCTTTCG 
ATGGAGGGCG GCCGCACGTC GATCCCCGGC TACCCCGCGG TAGGCGACGG ATGGAGGGAC
CTCGTCGAGG TGGCGGTCGA GCGGATCGCC GCCGCCGCGC AGGGCGGCGG CTTCCGCATC
GAGCAGATCA AGGAGAAGTA CGGAACGTTG CGCCTGTACG TCTGCCGCAC GGGCGGCTCC
GGCCAGACCG CGGCCGATGC GGTGCAGGAG GCCGTTGCGT TGGCGGAGGC GCGGTCCGCC
TGTACCTGCG AGCAGTGCGG CAAGGAAGGC GCGCTCTATA GCGCCGGATC GTGGCTCGTC
ACCGCCTGCT CCGATCACGC CCGGGGAGAA AAGATCCCGG TGCGGGAAGG GTTCGACAAC
ATTCTCATCG TCCGATCCTA CCGCGGAGGC CAACTGCCCA TCGTGACGTG CCGCCGGTAC
GACCGCGTCG ACGACCGCTT CATCGACGTC GATCCCGCCA CGCTGGGCAT CCAGGAGTGA
 
Protein sequence
MTNTSWRRRL VDRFPDLFLS MEGGRTSIPG YPAVGDGWRD LVEVAVERIA AAAQGGGFRI 
EQIKEKYGTL RLYVCRTGGS GQTAADAVQE AVALAEARSA CTCEQCGKEG ALYSAGSWLV
TACSDHARGE KIPVREGFDN ILIVRSYRGG QLPIVTCRRY DRVDDRFIDV DPATLGIQE