Gene RPD_3636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3636 
Symbol 
ID4024150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4058037 
End bp4059227 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content64% 
IMG OID637963840 
ProductDNA polymerase IV 
Protein accessionYP_570760 
Protein GI91978101 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.892851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCG TGAACCTCGC CCGATCTGGT GTTGGAATCC ATCTTGGTCG ACGGCGGGTG 
CTGACCGTGG CTGACCTCGA TCAGGACGAT GCCGACGAGC TCGCCGGCGC CGTGCCTTCG
CAGCGCCAGC GCAAGATCAT CCACGTGGAC ATGGATGCCT TCTACGCGTC CGTCGAGCAG
CGGGACAATC CGGAGCTCTG GGGCAGACCT GTCGCCGTTG GCGGGTCGAG GGAGCGGGGC
GTCGTCGCTG CCGCGAGCTA CGAAGCACGC AAGTTCGGGG TCCGCTCGGC GATGCCGTCG
GTTACTGCAA GGCGGCAGTG CCCGGGCCTG GTGTTCGTGA AGCCTCGCTT CGAGGTCTAC
AAGGCGATCA GCCAGCAGAT CCGCGAGATC TTCGCGGAGC ACACGCTCGT CATCGAGCCG
TTGTCGCTCG ACGAAGCATA TCTCTACGTG ACCGAGAACC TACAGGGCAT ATCACTGGCA
CGCGACATCG CATTGGCGAT CCGCGCCCGG ATCAAGACCG AGACCGGCCT CAACGCCTCC
GCCGGCATCT CCTACAACAA GTTCCTCGCC AAGCTCGCGT CCGACCACCG CAAGCCGAAC
GGCCAATACG TCATCTCTCC GGAGACGGGA CCCGCGTTCG TCGAGGCCCT GCCTGTCGGC
AAATTCCACG GCATCGGACC GGCGACAGCC GCCAGATTCC ATGCCCTCGG GATCCAGACC
GGCCTCGATA TCCGCGGCCG GACGCTGACG TTCTTAGAGG CGCACTTCGG CAAGGCCGGC
GCCTATTATT ACTGGATATC CCGCGGCATC GACGAGCGCC CGGTTCGCGC CAACCGCATC
CGAAAATCTG TCGGCGCCGA GAATACGTTT TCTCAGGATC TCACGGAGTT CGACGCCATG
GCCGCCGAGC TGCAGCCGCT CATCGACAAG GTGTGGCGCC ACTGTGAGAC CACAGGCAAT
CGCGGTCGGA CGGTGACGCT AAAGGTGAAG TTTGCAGATT TTGAAATTAT GTCGCGCAGC
CGATCCGTAC CTACAGCCGT CGGCGGCCGG GAAGACCTAG AGCGTCTGGC CGTCGGGTTG
CTTCAGGCTG CCATGCCGCT GCCTAAGGCG GTGCGGCTGC TGGGCGTCTC GCTGTCGTCG
CTTCGATCTG ACCTCGAAGA CCAGGGTAAG CAGATCGCAC TTCTGATCTG A
 
Protein sequence
MAGVNLARSG VGIHLGRRRV LTVADLDQDD ADELAGAVPS QRQRKIIHVD MDAFYASVEQ 
RDNPELWGRP VAVGGSRERG VVAAASYEAR KFGVRSAMPS VTARRQCPGL VFVKPRFEVY
KAISQQIREI FAEHTLVIEP LSLDEAYLYV TENLQGISLA RDIALAIRAR IKTETGLNAS
AGISYNKFLA KLASDHRKPN GQYVISPETG PAFVEALPVG KFHGIGPATA ARFHALGIQT
GLDIRGRTLT FLEAHFGKAG AYYYWISRGI DERPVRANRI RKSVGAENTF SQDLTEFDAM
AAELQPLIDK VWRHCETTGN RGRTVTLKVK FADFEIMSRS RSVPTAVGGR EDLERLAVGL
LQAAMPLPKA VRLLGVSLSS LRSDLEDQGK QIALLI