Gene RPD_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2927 
Symbol 
ID4023430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3263164 
End bp3263661 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content70% 
IMG OID637963127 
Producthypothetical protein 
Protein accessionYP_570055 
Protein GI91977396 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0113815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTT TCGCACCCGA TACGCCGCTC GGCCGACTGA TCGCCGCTCC GATGCGGCCG 
GGACGGCTCG ACTGGATCGG GCTGCGGCCG GCGCGTCGCG CGCCGATGCG GATCACGCAG
CAGGCGACGC TGATCGCCGG CCGCGGCATC GAAGGCGATC GCTATCGCAC CACCACCAAC
GGCGCCCGAC AGGTGACGCT GATCGCGGCC GAGGATCTGG CCGCGATCGC CGCGTTCCTC
GGCCGCGACG ACGTCGCTGC GGAATTGCTG CGGCGAAATC TCGTGACGCG CGGCATCAAT
CTGGTGGCGC TGAAGGGGCA GCGGTTTCGG ATCGGCGAAG CCTTGCTGGA AGGGGCCGGG
GACTGCGCGC CGTGCAGTCG GATGGAAGAG GGATTCGGCG AAGGCGGCTA CAATGCCGTC
CGCGGCCGCG GCGGTCTCAC CGCCCGCGTG CTCGAGGGCG GCGTGATCCG GATCGGCGAT
CGCGTCGAAC GCATCTAG
 
Protein sequence
MTSFAPDTPL GRLIAAPMRP GRLDWIGLRP ARRAPMRITQ QATLIAGRGI EGDRYRTTTN 
GARQVTLIAA EDLAAIAAFL GRDDVAAELL RRNLVTRGIN LVALKGQRFR IGEALLEGAG
DCAPCSRMEE GFGEGGYNAV RGRGGLTARV LEGGVIRIGD RVERI