| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2389 |
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| Symbol | |
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| ID | 4022878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2665335 |
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| End bp | 2667182 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637962581 |
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| Product | ABC transporter related |
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| Protein accession | YP_569521 |
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| Protein GI | 91976862 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.168027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGT CCGACAGGCG ATCAATCAGA GAACGTGTCG GGGCACTGAG AAATCTGCGG
CCCTTCATCG CGATGGTCTG GCGCACCAGC CCGTCGCTGA CACTGACCTC GCTCTTGCTT
CGCCTGCTGC GGGCGGTGCT TCCGGTGGCG ACGCTGTTCG TCGGCAAGCT GATCATCGAC
GAAGTGGTGC TGCTGGTGCA ATTGCCCGAC AAGCCTGGCA CGTACGGGCA GTGGCTGGAG
GGAGGCCTTC TCAACCGGTT GGGCCTGCTG CTTGCGGCCG AGCTGTGTCT GGCGATCGTG
GCCGATGTAT TGGGACGGAT TGTTGCGCTG GTGGACAGCC TGCTCTCCGA ACGCGTGACC
AATGCCTCCA GCGTTCGCCT GATGCAGCAC GCCGCGACGC TGGATCTCGA AGACTTCGAA
GACTCCGATT TCCAGGACCA GTTGGAACGC GCACGCCGGC AGACCAGCGG TCGGATGACG
CTGATGGCCC AATTGTTCGG CCAGGCGCAG GACATCGTCA CCGTCGCCAG CTTCACCGGC
GGGCTGATCT TCTACGCGCC GTGGCTGATC GCGTTGTTGC TGCTGGCGCT GGTGCCGTCG
TTTCTCGGCG AGGCGCATTT CAGCGCCAAG AGCTATTCGT TGGATTTCGG GCGCACGCCG
GAACGGCGCG GGCTGGACTA TGTGCGTCAG ACCGCCGCCA GCGTCGAGAC CGCCAAGGAA
GTGAAGATTT TTGGGCTCAG CGGCTTTCTG ATCGACCGCT ACGTGCAACT GGCCACCAAA
TTCTATGCCG CCAATCGCGA CCTTGCGCTG CGTCGCGCCG GCTGGGGCAG CCTGTTCACC
GCGCTCGGTA CCGCCGGCTA TTACCTGGCC TATGGCTATA TCGTCTGGCG CACATTGACC
GGCGAATTTT CCGTCGGCGA TCTCACCTTT CTGGCCGGCT CGTTCCGGCG TCTCAGCACG
CTGCTCGAAA GTCTGCTGAC GAGTTTCTCG ATCACCGCCA GCCAGGCGCT GTATCTGAAC
GACCTGTTCG CCTTCTTCGA GGTCAAGCCC GAAATCCTGT CACCGCCAGA TCCGCGGCCG
TTCCCGCAGC CGATTCGCGA GGGGTTCGTG TTCGAGGATG TCGGCTTCAT CTATCCCGGC
GCGGAGCGTT GGGCGGTGCG GCATCTCAGC TTTGCGTTGC GTTCCGGCGA GATGCTGGCG
CTGGTCGGTG AAAACGGCGC CGGCAAGACC ACCTTGGTGA AACTGCTGGC GCGTTTGTAT
GATCCGGACG AAGGCCGGGT GCTGCTCGAT GGCCACGATT TGCGCGAGTA CGATCTGGAA
TCGCTGCGCG GTAATATGGG CGTGATCTTT CAGGATTTCT TCCGCTACAA CCTCACCGCC
GCCGACAATG TTGCGGTCGG CAAGATCGAC GCACGCGACG ACCGGGATCG GATCGAGCGC
GCCGCGCGGA GCAGTCAGGC CGACGAGGTG GTCGCGCGGT TGCCCGGCGG TTACGACCAG
ATGATCGGCA AGCGCTTCCG CAACGGCATC GAACTATCCG GCGGGGAATG GCAGAAGATC
GCGATCGCCC GCGCCTATAT GCGCGAGGCG CCCGTGCTGA TCCTGGATGA GCCGACCGCG
GCGCTGGATG CGCGCTCCGA ATTCGAAGTG TTTCAGCGCT TCAAGGCGCT CAGCGCCGGC
AAGACCGGCA TTCTGATCTC GCACCGCTTT TCCAGCGTAC GCATGGCCGA TCGCATTCTC
GTTCTCGCGG ACGGCAAGGT CGAATCCGCG GGCACGCATG ACGAGCTGAT GAGGCAGGGT
GGCCGCTATT CCGATTTGTT CGAATTGCAG GCTGCCGGCT ACAGATAG
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| Protein sequence | MQMSDRRSIR ERVGALRNLR PFIAMVWRTS PSLTLTSLLL RLLRAVLPVA TLFVGKLIID
EVVLLVQLPD KPGTYGQWLE GGLLNRLGLL LAAELCLAIV ADVLGRIVAL VDSLLSERVT
NASSVRLMQH AATLDLEDFE DSDFQDQLER ARRQTSGRMT LMAQLFGQAQ DIVTVASFTG
GLIFYAPWLI ALLLLALVPS FLGEAHFSAK SYSLDFGRTP ERRGLDYVRQ TAASVETAKE
VKIFGLSGFL IDRYVQLATK FYAANRDLAL RRAGWGSLFT ALGTAGYYLA YGYIVWRTLT
GEFSVGDLTF LAGSFRRLST LLESLLTSFS ITASQALYLN DLFAFFEVKP EILSPPDPRP
FPQPIREGFV FEDVGFIYPG AERWAVRHLS FALRSGEMLA LVGENGAGKT TLVKLLARLY
DPDEGRVLLD GHDLREYDLE SLRGNMGVIF QDFFRYNLTA ADNVAVGKID ARDDRDRIER
AARSSQADEV VARLPGGYDQ MIGKRFRNGI ELSGGEWQKI AIARAYMREA PVLILDEPTA
ALDARSEFEV FQRFKALSAG KTGILISHRF SSVRMADRIL VLADGKVESA GTHDELMRQG
GRYSDLFELQ AAGYR
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