| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1972 |
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| Symbol | |
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| ID | 4022454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2210219 |
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| End bp | 2211691 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637962165 |
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| Product | DNA-cytosine methyltransferase |
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| Protein accession | YP_569108 |
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| Protein GI | 91976449 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0825702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.570166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACG CTCTGTTGCA GCGTGTCGAG ATCTCGGAAA CGGATGGGAT GCGAGGGGCA
GACGGTTTAT CGGTGGAGCT GCGGGTCGCT TCGTTGTTTG CGGGAATCGG AGGGTTCGAC
AAAGCTTTTG AATCGGTCTC AGCCTCCGTG GTCGCCCAGT GCGAGATTGA CTCCTTCTGC
CGCGCCGTAC TCAGGCGACA TTGGCCACAG ACTAAGCTTT TCGAAGATAT TACCAAGATC
AACCCAGCCG AATTTCCAGC GGCCGACATT TGGACCGCAG GCTTTCCCTG CCAAGATGTT
TCGCTCGCGC GCGGTAACCA CGGTCGAGAT GGGCTCAAAG GCAATCACAC GAGTCTTTTC
TTTAAGTTGA TGGATCTGGC CGAGGCTAAG AAGCCTAAGA TCATCCTGCT TGAAAACGTC
GTTGGCCTAC TCAATTCACA TCAGGGTTGT GATTTTGCAA TCATCTTGCG TGAGCTAACT
AATCAAGGAT ACGCCGTTTC TTGGCGTGTT CTGAATGCCC GTTACTTCGG CTCACCGCAA
TCGAGATCGC GCGTCTTTAT GGTGGCTTGG CGCGGCGACT ACAGGTTGGC GCTTGCGTCC
CTTTTCGAGC CGGTACGTGG TGCGAAGACG GCGGCCGAAC GCAAGGGATT TGTGACAAAG
ACGACGCATG CAAAGACCGG AGCGATTGTG CCTCAGGTCG CATATTGTGT CGCTGCAACG
TCGGGTAGGC ACACCGGAAA CGATTGGGCG CGTTCCTATA TTTCCTACAA GGATCGTGTC
CGCAGGCCGA CTGTGAGCGA AAGCGAGCGT TTGCAAGGTT TCGAAGCCGG GTGGACTGTG
CCTGGCGCTG GCTACCGCGA ACCCGCGCGC GGTTTCGATT CCGAGCGCTA CCGCGCGGTC
GGTAATGCAG TCGCGGTGCC TGTGGTCAGG TGGATCGCTC AGCGAATGAC AGCGGCGCTA
GCGCAGCCGA AAGCCCCATC AAGCCGCCGT GGTTTTATGG AGGAGTGCTT GCTCATCGCG
CCCGATCTTG CGAACTCGAC GGAGACACTT CGCTTTTCAG ACATTATGGA GGAGGTCAAC
AAGGGGGAAT TCGTCTACCG CTGGAAGGGC TGCGGCGTCG CCTGGGGTAA CAATATTGTC
GAAGGAGCTA CCGCTCCCGC TCCGTCGCAA GTCGTAGACT CGCGCTTTGT CAATTTGCTT
GACAATGAAG TGCCTGACGA CCGCTATTTT CTCACTCCTA ACGCTGCCAT CGGCATTTTG
AGGAGGGCGG ATTCGGTTGG CCGAACGCTG TTCGGACCGA TGCGTGAAGC ATTGGAAAAT
ATGGTAAAAT GCTTCTCTGC TGCGGATTCG CCGCGGGTTT TAGCCGGAGA GCAGATTGCC
AAGGTCAGCA TTCGTCCGCC TCGCACAAAC AAGCGCGGCA ATTCTCAACT CGATCGCTCA
ATTGCCGTCA GGGCCACACG CATCTCCTAT TAA
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| Protein sequence | MNHALLQRVE ISETDGMRGA DGLSVELRVA SLFAGIGGFD KAFESVSASV VAQCEIDSFC
RAVLRRHWPQ TKLFEDITKI NPAEFPAADI WTAGFPCQDV SLARGNHGRD GLKGNHTSLF
FKLMDLAEAK KPKIILLENV VGLLNSHQGC DFAIILRELT NQGYAVSWRV LNARYFGSPQ
SRSRVFMVAW RGDYRLALAS LFEPVRGAKT AAERKGFVTK TTHAKTGAIV PQVAYCVAAT
SGRHTGNDWA RSYISYKDRV RRPTVSESER LQGFEAGWTV PGAGYREPAR GFDSERYRAV
GNAVAVPVVR WIAQRMTAAL AQPKAPSSRR GFMEECLLIA PDLANSTETL RFSDIMEEVN
KGEFVYRWKG CGVAWGNNIV EGATAPAPSQ VVDSRFVNLL DNEVPDDRYF LTPNAAIGIL
RRADSVGRTL FGPMREALEN MVKCFSAADS PRVLAGEQIA KVSIRPPRTN KRGNSQLDRS
IAVRATRISY
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