| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1878 |
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| Symbol | |
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| ID | 4022360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2107099 |
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| End bp | 2108013 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962071 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_569014 |
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| Protein GI | 91976355 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0386113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG CACTCGACGG CAAAGTCATC ATCGTCACCG GCGCGGGGCG CGGCATCGGC
CGCGAGATCG CGCTGCTCGC TGCGCGCGAA GGCGCCAAGG TGGTGGTCAA CGATCCCGGC
GGCGCCGCCG ACGGCTCGGG CACCGACGCC TCGCCGGCCG AGCAGGTGGT CGAGGAGATC
AAGAAGGAAG GCGGCACCGC GGTCGCGAAT TTCGAGACCG TCGCCGAGGC GGTCCCCGCC
AGCAAGATCG TCAAACAGGC AGTTGATACT TACGGCAAGC TCGACGGCGT CGTGAACAAT
GCCGGCATCC TGCGCGACGC CATCTTCCAC CGCATGAGCA TCGATGCCTT CGAGCAGGTC
ATCAAGGTGC ATCTGATGGG CTCGTTCTAT GTGTCGCACG CCGCAGCAAG GCTGTACCGC
GAGCAGGAAA GCGGTTCCTT CGTCCACTTC ACCTCGACCT CGGGGCTGAT CGGCAATTTC
GGCCAGGCCA ACTACGCCGC CGCCAAGCTC GGCATCGTCG GCCTGTCGAA GTCGATCGCG
CTCGACATGC AGCGCTTCAA CGTCCGCTCC AACTGCGTCT CTCCGTTCGC CTGGTCGCGG
CTGATCGGCA CGATCCCGAC CGAGACCGAG GAAGAGAAGG CCCGCGTCGC GCGGATGCAG
CAGATGGGTC CGGAGAAGAT TGCGCCGTTG TCGGTTTTCC TGCTCGGCGA CGCCGCCAAG
GACGTCACCG GCCAGATCTT CGCGGTGCGG ATGAACGAGA TCTTCCTGAT GGGCCAGTCG
CGCCCGATCC GCTCGGTGCA TCGCGACGGC GGCTGGACCT GCGAAACGCT GGCCGAGCAC
GGCATGCCGG CGCTGAAGGG TTCGTTCTAC AAGCTCGACC GCTCCGCCGA CATCTTCAAC
TGGGACGCGA TCTGA
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| Protein sequence | MAKALDGKVI IVTGAGRGIG REIALLAARE GAKVVVNDPG GAADGSGTDA SPAEQVVEEI
KKEGGTAVAN FETVAEAVPA SKIVKQAVDT YGKLDGVVNN AGILRDAIFH RMSIDAFEQV
IKVHLMGSFY VSHAAARLYR EQESGSFVHF TSTSGLIGNF GQANYAAAKL GIVGLSKSIA
LDMQRFNVRS NCVSPFAWSR LIGTIPTETE EEKARVARMQ QMGPEKIAPL SVFLLGDAAK
DVTGQIFAVR MNEIFLMGQS RPIRSVHRDG GWTCETLAEH GMPALKGSFY KLDRSADIFN
WDAI
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