| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1834 |
|---|
| Symbol | |
|---|
| ID | 4022316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 2052464 |
|---|
| End bp | 2053429 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637962028 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_568971 |
|---|
| Protein GI | 91976312 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCAG TGGCGCGTAT CGATCCGAAG ACGATCTTCA GCGCCGAGGA ATGGGCGCGG
CTGACGCGGC GCAGTTCGGC GCGCGGGGTG TGGCTCGTCG CGCACGCCTG GGGCACGATC
GCCGCCGCAA TGGCGCTGGT GACGATCTGG CCCAATCCGC TGACCTGGCT GATCGCGGTG
ATGATCGTCG GCACGCGGCA ACTCGGCCTC GCTATCCTGA TGCACGAGGC CGCGCATGGC
GGGCTGCATC GCAATCAAAA GCTCAACGAG TGGATCGGGC AATGGCTGTG CGCGGTGCCG
GTCGGTGCCG ATCTTGCGGC CTATCGCAGC TACCATCTGC AGCATCACAA ATACACCCAG
CAGCCGGAAG ACCCCGACCT GTCGCTGTCG GCGCCGTTTC CGATCAGCAA ACAGAGTTTT
CTGCGCAAGG CGATCCGCGA CCTCACCGGA CAGACGTTCG TCAAGCAGCG GCTGCCGTTG
TTGAAGGCGC TGTTTGCGAC GCGTCACGCG CGGGAGGACG TGACGCATGA GAGCTTCGTC
GCCAGCGGCG CAGACCGGAC GAAGCGCTTC CTCGCCGCGA ATCTCGCATT GTTCGTGGTG
TTCTGGCTGT GCGGCGCCGG CGTGTGGTTC GTCGGCGTCT GGCTGTTCGC AATGGCGACC
TGGCTGCCGC TGGTGACGCG GGTCCGCAAC ATCGCCGAGC ACGCCTGCAC CTCGACCAGC
CCCGATCCGT TCAGCCAGGC GCGCACCACG CTCGCCAACC CGCTCGAGCG TCTGCTGATC
GCGCCGTATT GGGTGAACTA TCATGCCGAG CATCATCTGT TCATGTACCT GCCCTGCTAC
AATCTTCCCG AAGCGCATCG GCTGTTGCGC GACAAGGCGC TGATCGGCCG CGTCGCGGTC
GCGCCGTCCT ATCGCGATGT GCTGCGACTG GCGATGTCGC GGGAGCGTTC CACGCGCGCC
GCGTGA
|
|---|
| Protein sequence | MPAVARIDPK TIFSAEEWAR LTRRSSARGV WLVAHAWGTI AAAMALVTIW PNPLTWLIAV
MIVGTRQLGL AILMHEAAHG GLHRNQKLNE WIGQWLCAVP VGADLAAYRS YHLQHHKYTQ
QPEDPDLSLS APFPISKQSF LRKAIRDLTG QTFVKQRLPL LKALFATRHA REDVTHESFV
ASGADRTKRF LAANLALFVV FWLCGAGVWF VGVWLFAMAT WLPLVTRVRN IAEHACTSTS
PDPFSQARTT LANPLERLLI APYWVNYHAE HHLFMYLPCY NLPEAHRLLR DKALIGRVAV
APSYRDVLRL AMSRERSTRA A
|
|---|
| |