Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1785 |
Symbol | |
ID | 4022267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1999861 |
End bp | 2001105 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961979 |
Product | VWA containing CoxE-like |
Protein accession | YP_568922 |
Protein GI | 91976263 |
COG category | [R] General function prediction only |
COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.23574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.248193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGCTCA TTCTTTGCTC GATAACTTTG AGCGAGTTCG ACATGCCCAC AATCGATCAC CTCAATCCGC CCACCGGCAT GATGGCCGAC AACGTCGTCG GCTTTGCCCG CGCGCTGCGC GCCGCCGGGT TGCCGGTCGG GCCCGGCGCG GTGATCGATG CGCTGAACGC GCTGCAACTG ATCGAGATCG GCAATCGCGA CGATCTCTAC GCGACGTTGG AGGCGATCTT CGTCAAGCGT CGCGAGCACG CGCTGATCTT CGCGCAGGCC TTCGCGCTGT TCTTCCGCGC CGCGGAGGAG TGGCAGCACA TGCTGGATTC GATCCCGCTG CCGGATCACG CCAGGAAGAA GCCGCCGCCG GCCTCGCGCC GGGTGCAGGA AGCGATGGCG CCGTCGACGA CCCGGGACTT CCCTTCCGCC GAGGAGCAGG AAATCCGGCT CGCGGTGTCG GACAAGGAGA TCCTGCAGAA GAAGGACTTC GCGCAGATGA GCGCTGCGGA GATCGCCGAG GTCACTCGCT CGATCGCGCG GATGCGGCTG CCGCAGGCGG AATTGCGCAC GCGCCGCGTC CGGCCGGACA AGCGCGGTCT CAAGCTCGAT CTGCGCCGCA CGCTGCGCGC TTCGCTCCGG ACCGGCGGCG ACATCGTCGA TATCCGCAGG CTCGGCCTGA TCGACAAGCC GGCGCCGATC GTGGCGCTGC TCGATATCTC CGGCTCGATG AGCGAATACA CGCGGCTGTT CCTGCACTTC CTCCACGCCA TCACCGACGA TCGCAAGCGG GTCTCGACCT TCCTGTTCGG CACGCGGCTG ACCAACGTCA CCCGCGCGCT GCGGGCGCGC GATCCCGACG AGGCGCTGGC GAGTTGCACG TCGTCGGTCG AGGACTGGGC CGGCGGCACG CGGATCGCGA CCTCGCTGCA TGTCTTCAAC AAGGCGTGGG CGCGCCGCGT GCTGGGGCAG GGTGCGATCG TGCTGCTGAT TTCCGACGGG CTGGAGCGCG AGGCCGATAG CAAGCTCGCC TTCGAGATGG ACCGGCTGCA TCGCTCCTGC CGGCGGCTGA TCTGGCTCAA CCCGCTGCTG CGCTTCGGCG GTTTCGAGCC GCGCGCGCAG GGCATCAAAA TGATGCTACC CCACGTTGAC GAATTCCGCC CGGTGCATAA TCTGACCTCG ATGCAGGGAT TGATCGAGGC GCTGTCCTCC GCGCCGCCGC CGCACCATTT CAGTGCGATC CGCTCGGCCG CATAA
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Protein sequence | MLLILCSITL SEFDMPTIDH LNPPTGMMAD NVVGFARALR AAGLPVGPGA VIDALNALQL IEIGNRDDLY ATLEAIFVKR REHALIFAQA FALFFRAAEE WQHMLDSIPL PDHARKKPPP ASRRVQEAMA PSTTRDFPSA EEQEIRLAVS DKEILQKKDF AQMSAAEIAE VTRSIARMRL PQAELRTRRV RPDKRGLKLD LRRTLRASLR TGGDIVDIRR LGLIDKPAPI VALLDISGSM SEYTRLFLHF LHAITDDRKR VSTFLFGTRL TNVTRALRAR DPDEALASCT SSVEDWAGGT RIATSLHVFN KAWARRVLGQ GAIVLLISDG LEREADSKLA FEMDRLHRSC RRLIWLNPLL RFGGFEPRAQ GIKMMLPHVD EFRPVHNLTS MQGLIEALSS APPPHHFSAI RSAA
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