| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1738 |
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| Symbol | |
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| ID | 4022220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1955383 |
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| End bp | 1956576 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637961932 |
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| Product | RNA methyltransferase TrmH, group 1 |
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| Protein accession | YP_568875 |
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| Protein GI | 91976216 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[S] Function unknown |
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| COG ID | [COG0565] rRNA methylase
[COG2852] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTT CCGGCACCGA CAAATCCAAG CCCGCCGCGG ACCTCGCCGG GCCTGTTGTT
ATTCTGGTTG AGCCGCAGCT CGGTGAGAAC ATCGGGATGT GCGCCCGTGC GATGGGTAAT
TTCGGCCTGA AACGTCTGCG GCTGGTGAAG CCGCGCGACG GCTGGCCGAA CATCGCGGCG
CAGCGCGCCG CCGCTGGCGC CGACGATATT CTCGAACAAG CCGAACTGTT CGACACCGTA
CGAGAGGCGG TGGCCGACTG CACGCTGCTG TTCGCCACCA CCGCGCGCGC CCACGATCAG
GCGAAGCCGG TGCGCGGGCC GGAGGCGGCG GCGCAGGAGA TCGTGACCGC GACCGCGGGC
GGCGCGACCG CCGGCATCCT GTTCGGCCGC GAGCGCTACG GCCTTCAGAA CGAGGAAGTC
GCGCTCGCCA ACCGCATCGT CACCTTTCCG GTCAATCCCG CCTTCGCCTC GCTCAACCTG
GCGCAAGCCG TGCTGCTGAT GGGCTACGAG TGGTTCAAGC ACGCGACCCA AGGCGCGCTG
CCGTTCGCGA TGCCGGAGCG CTCCGAACCG GCGTCGCAGC ACCAGATGAC CGCGTTCTTC
GACAACCTCG TCGCCGAACT CGACCGCGTC GAGTTTCTCC GCCCGCCGGA GAAGCGCGAC
ACCATGCTGG TGAACCTGCG CAACATCTTT ACCCGGATGG AGCCGACCAA GCAGGACATG
CACACGCTGC ACGGCGCGGT GATGGCGATC GCCGAAGGCC GCAAGGGCCC GGCCAAGGGC
GGCGTGCTCG ACGGCGAGCA GGCGACGCGG CTGCGGGCGC TGCTTGCCGA GCGGACCGCG
AGCGGCGCCG ATCACGACGG TGGCTCGATG CGCGGCCTGG CGCGGCTGTT GCGGCGTAAC
CCCACCGACG CCGAGCGGCT GCTGTGGGAA AAGCTCCGCA CCGACCGCCG CTTCGCCGGC
AACTTCAAAC GCCAGACCCC GGTGGGTCGC CACATTCCGG ACTTCGTTTC GTTCGCCCGC
AAGATCGCGA TCGAACTGGT CAACGAAGGC GAGACCGACG CGATCTCGCA GGACCGCGCC
GCGCGAAAAG CGTGGCTGGA GGCGCGGGAC TATCAGGTGG TGTGGGTCGA GGCGGTGGCG
ATCGAGCAGC AACTCGACGC GGTGCTGGGG CGGCTGGAGA CGGCGATGCA ATAG
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| Protein sequence | MAGSGTDKSK PAADLAGPVV ILVEPQLGEN IGMCARAMGN FGLKRLRLVK PRDGWPNIAA
QRAAAGADDI LEQAELFDTV REAVADCTLL FATTARAHDQ AKPVRGPEAA AQEIVTATAG
GATAGILFGR ERYGLQNEEV ALANRIVTFP VNPAFASLNL AQAVLLMGYE WFKHATQGAL
PFAMPERSEP ASQHQMTAFF DNLVAELDRV EFLRPPEKRD TMLVNLRNIF TRMEPTKQDM
HTLHGAVMAI AEGRKGPAKG GVLDGEQATR LRALLAERTA SGADHDGGSM RGLARLLRRN
PTDAERLLWE KLRTDRRFAG NFKRQTPVGR HIPDFVSFAR KIAIELVNEG ETDAISQDRA
ARKAWLEARD YQVVWVEAVA IEQQLDAVLG RLETAMQ
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