Gene RPD_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0863 
Symbol 
ID4021337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp967782 
End bp968231 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID637961053 
Producthypothetical protein 
Protein accessionYP_568002 
Protein GI91975343 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.627651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACA TGCTGGGCGC GCTGGGACCG TGGAACTGGC TGATCATCGG CTTCGTGCTG 
ATGGCGCTGG AGCTGCTCGC GCCGGGAATT TTCCTGTTCT GGCTCGGCCT CGCCGCGCTG
CTGTCAGGGC TGGCGGCGTT CGCGCTGCAT CTATCGTGGC AGCTCCAGAT CCTTCTGTTC
GCGCTGTTCG CCGTCGCGGC GGTGCCGCTA TGGCGGCGGA TGGCGCGCGG CGGTGCGGCC
GAGTCCAACG CCACCAACCC GTTCCTCAAT CGCCGCGCCG ACGCACTGGT CGGCCGCATC
TTCACGCTGG AGAAGCCGAT CGTCGACGGC GTCGGCACGG TGCGGATCGA CGACACCTTC
TGGCGCGTCA CCGGTCCCGA CGCCCCTGCC GGCAGCCGGG TGAAAATCGT GCAGGCGGAT
GGAGTGAATT TGACGGTAGC GGGGGCGTAG
 
Protein sequence
MLDMLGALGP WNWLIIGFVL MALELLAPGI FLFWLGLAAL LSGLAAFALH LSWQLQILLF 
ALFAVAAVPL WRRMARGGAA ESNATNPFLN RRADALVGRI FTLEKPIVDG VGTVRIDDTF
WRVTGPDAPA GSRVKIVQAD GVNLTVAGA