Gene RPD_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0464 
Symbol 
ID4020931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp532736 
End bp534718 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content68% 
IMG OID637960650 
Productacyltransferase 3 
Protein accessionYP_567603 
Protein GI91974944 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.804151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.342656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCGA CCTACCGCAG CGATATCGAC GGATTGCGGG CCATCGCCGT GCTGCTGGTG 
GTCGCGTTCC ACGCCTTCCC GAATTCGGTT CGGGGCGGCT TCGTCGGCGT CGACGTGTTC
TTCGTGATCT CCGGATTCCT GATCACCTCG ATCATCTGCC AGGCGCAACA CAGCGACGGC
TTCAGTTTCC GGACCTTCTA CGCGCGCCGC ATCAACCGGA TCTTTCCGGC GCTGGCGCTG
GTGCTGACGG TCTGCGCGGT CGCCGGTTGG TTCATGCTGT TCCCGGTGGA TTATCGCGAC
GCCGGCAAGG CGATCGGCTT CGGCGCCGCG TTTCTCTCCA ACCTCGCGCT GCTCCACGAC
GCCGGCTATT TCGCGACGAC GTCCGAACTC AATCCGCTGC TGCATCTGTG GTCGCTCGGC
GTCGAGGAGC AGTTCTACAT CCTGTGGCCG CCGGTGATCG TGCTGGCGTG GCGATGGAAG
CGCGGCGCGC TGATCGCGGC GCTCGTCATC CTGCTGGCGT CGTTCGCCGC CAATATTCTG
CTGACGCCCC GCAACGCGCT CGCCGCCTTC TATCTGCCGG TGACGCGGTT CTGGGAACTG
ATGGCCGGCT GCCTGCTCGC GATCATCGCG ACCGCGGGAC CCGGCCGTGA TATCAGTTCG
ATCGCAGCAC TCGATCGCCT GCGCGCGATG CTCGAACGCC ATGAGGCGCT GCTCCGCGCC
GGCTGCGCCT GGTTCGGCCT GTTGCTTCTC GCCGCCGGCG CCGTGCTGAT CAGCAGCGAT
CGCGGCTTTC CCGGCTGGTG GGCGGCGCTG CCGGTGCTCG GCGCGGCGCT GTTGATCTTC
GCCGGCCCGT CGCCATGGGT GAACCGGCTG CTGCTCGGCA ACCGCGCGAT GGTCTATGTC
GGGCTGATCA GCTATCCGCT GTATCTGTGG CACTGGCCGC TGCTCGCCGC GATCCGGATC
GTCCGGTTCG GCGAGGAGCC GCCGCCGCTG ATGAAGGCGA TCGCGATCCT GCTCGCTTTC
GCGCTGGCGG ATATCACCTG GCGATTCGTC GAGCGGCCGT TCCGGTTCCG GCCGACGCGA
TCGAAGACCG CCGCCGCCTT CGCGTCGGTC GCTGTGATCG GCGCGGTCGG CGCCGGCATC
TATGCGGCCG ATGGATTTCC CTCGCGCTTC GGCCCCGAAC TGCAGGCCAT CACCCGCGAT
CTGACCGCCG AGGCTTCGAC CGCATATCGC GCCGGCGCCT GCTTCCTGAC CTCGGAGTCG
CACTTTGCCG AGGCTTGCGA CGACAATGCG CCGGCCGACG CGCCGCGATT GCTGCTGTGG
GGCGACTCCC ATGCGGCGCA TCTCTATCCC GGCCTGCGGG CGCTGCAGAT CGCCGATGGA
AATATCCGCC TGTCGCAATA CACCACAGCG GGTTGCCCGC CGATGTTCGG CTTTGCGAGC
GAGAAGTCGC CGGCCTGCGC CGCGAACAAC GCCATCGTTC GCGCCCGTCT GAGTAGTCTG
AAGCCCGACA CCGTGATCAT GGTGGCGCGG CAATGGCGCG ACTACGACGG CCCCGATCGC
GACCCGCAAG CCAGTGATGC GATGATCCGC GCGACGATCG CCGAGGTCCG GGCCGCCGGC
GTCCGGCGCA TCGTCGTGGT CGGGATGTTT CCGAGCTGGC GGACGCCGCC GCGGCGCATC
CTCGCGCAAT CCTATCGCCA GCACGCCGCC GGACTGATCA CCGCCGACGC GATACCGATC
CGGGATCGCA GCGGCCATCT GGATTCGTCG CGCGCCGACG ACAACGAGCG CCTGCGCCGG
ATCTTCGAAG CCGAAGGCGC GGCGTTCATT TCGCCGACTC CGGTGTTCTG CAATCCGGAC
GGCTGCCTGC TCGCAGCGCC GGACAGCGGC GGCACCCCGG TGGTCCACGA CGGCAGCCAC
CTGACCGCGG CCGGCTCGGT GTTCTTCGCG CGCGAGACGG CGCCGGCTAT TCTCGGGCGG
TGA
 
Protein sequence
MRPTYRSDID GLRAIAVLLV VAFHAFPNSV RGGFVGVDVF FVISGFLITS IICQAQHSDG 
FSFRTFYARR INRIFPALAL VLTVCAVAGW FMLFPVDYRD AGKAIGFGAA FLSNLALLHD
AGYFATTSEL NPLLHLWSLG VEEQFYILWP PVIVLAWRWK RGALIAALVI LLASFAANIL
LTPRNALAAF YLPVTRFWEL MAGCLLAIIA TAGPGRDISS IAALDRLRAM LERHEALLRA
GCAWFGLLLL AAGAVLISSD RGFPGWWAAL PVLGAALLIF AGPSPWVNRL LLGNRAMVYV
GLISYPLYLW HWPLLAAIRI VRFGEEPPPL MKAIAILLAF ALADITWRFV ERPFRFRPTR
SKTAAAFASV AVIGAVGAGI YAADGFPSRF GPELQAITRD LTAEASTAYR AGACFLTSES
HFAEACDDNA PADAPRLLLW GDSHAAHLYP GLRALQIADG NIRLSQYTTA GCPPMFGFAS
EKSPACAANN AIVRARLSSL KPDTVIMVAR QWRDYDGPDR DPQASDAMIR ATIAEVRAAG
VRRIVVVGMF PSWRTPPRRI LAQSYRQHAA GLITADAIPI RDRSGHLDSS RADDNERLRR
IFEAEGAAFI SPTPVFCNPD GCLLAAPDSG GTPVVHDGSH LTAAGSVFFA RETAPAILGR