Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0239 |
Symbol | |
ID | 4020697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 277926 |
End bp | 279053 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637960418 |
Product | HlyC/CorC family transporters |
Protein accession | YP_567380 |
Protein GI | 91974721 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACG GCGACAGTAC GCAGAACGCA GCGCAACCAG CGGAGCAGGA CTTAAGCCGG CAGCAATTGC CGGCGGTGGT GCATCAGGGC GAGGTACTCC GGCCGGTGGC CGGCGCCTGG CTGATCCGCG CGATCCGCTC GCTGTTCGGG TGGAAGCCCG GCTCGGTGCG CGACGATCTG CAGGTCGTGC TCGATACCAG TCCGCCCGAC GACACCGGCT TCACCGCGCT CGAGCGCACC ATGCTGCGCA ACATCCTCGG GCTGCACGAG CGCCGGATCG CCGACGTGAT GGTGCATCGC GCCGACATCG TCGCGATCAA GCAGGAGATT CCGCTCGGCG AACTGATGAG TCTGTTCGAG GGCGCGGCGC ATTCCCGCCT CGTGGTCTAC AACGAGACGC TCGACGATCC GGTCGGCCTG GTCCACATCC GCGATCTCGT CGCGTTCATG ACCTCGAAGG CCAAGGTCGC GCCGCAGACC GTGGCCAAGC GTAAGAAGAC GCTGCCGGCC GGGCTCGATC TGCGCGCGAT CGATTTGAAG ATGCCGCTCA CCGAGACCGG CATCATCCGC AAATTGTTGT ACGTGCCGCC GTCGATGCGG GCGATCGATC TGCTCGCGCA GATGCAGGCG GCGCGGATCC ATCTCGCGCT GGTGGTCGAC GAATATGGCG GCACCGACGG CCTGGTGTCG ATCGAGGACA TCGTCGAACA GATCGTCGGC GAGATCGATG ATGAGCACGA CAGCGCCGAG CCACCCTCGA TCGTGCGGCA GCCCGACGGC TCGTTCATCG CCGATGCGCG CACCAGCCTC GAGGATGCGA GCGTGATGAT CGGTGACGAC TTTGTGACCG GCGAGGCCGG AGAGGACGTC GAGACGCTCG GCGGCTATCT GGTCAATCAC GTCGGCCGCC TGCCGGTGCG CGGCGAAGTG ATTTCCGGCC CCGGTAATTT CGAGATCGAG GTGCTGGACG CCGACCCGCG CCGCGTCAAG CGGCTGCGCA TCGGCATCCG CAAGGAACGC GCCGTCGCGC GGCCGCGTGA GACGCGCCGG CGCGAACCGG CGTCCGATCA GCCTGCAACT GCGCCCACCG ATACGACCAA TCCGAATCCT TCGCCGCCCG GCGAGTGA
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Protein sequence | MPDGDSTQNA AQPAEQDLSR QQLPAVVHQG EVLRPVAGAW LIRAIRSLFG WKPGSVRDDL QVVLDTSPPD DTGFTALERT MLRNILGLHE RRIADVMVHR ADIVAIKQEI PLGELMSLFE GAAHSRLVVY NETLDDPVGL VHIRDLVAFM TSKAKVAPQT VAKRKKTLPA GLDLRAIDLK MPLTETGIIR KLLYVPPSMR AIDLLAQMQA ARIHLALVVD EYGGTDGLVS IEDIVEQIVG EIDDEHDSAE PPSIVRQPDG SFIADARTSL EDASVMIGDD FVTGEAGEDV ETLGGYLVNH VGRLPVRGEV ISGPGNFEIE VLDADPRRVK RLRIGIRKER AVARPRETRR REPASDQPAT APTDTTNPNP SPPGE
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