| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0198 |
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| Symbol | trpA |
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| ID | 4020656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 221783 |
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| End bp | 222619 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960377 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_567339 |
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| Protein GI | 91974680 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC GTATCGATAC CCGCTTTGCC GAGTTGAAGA AGCAGGGCCG CTCCGCCTTC
GTCACTTTCG TGATGGCCGG AGATCCCGAT CTCGCCACCT CGCTGCAGGT CCTGAAGGCG
CTGCCCGCCG CCGGCGCGGA TATCATTGAG ATCGGAATGC CGTTCACCGA CCCGATGGCC
GACGGACCGG CGATCCAGGC CGCGGGGCTG CGGGCGCTCC ATTCCGGCGC CACGCTGAGC
CACACGCTGG GGCTGGTGCG CGACTTCCGC AAGGACGACG ACACCACGCC GATGGTGCTG
ATGGGTTACT ACAATCCGAT CTATATCTAC GGCGTCGATG CGTTTCTCGC CGACGCCAAG
GCGGCCGGCG TCGACGGGCT GATCATCGTC GACCTGCCGC CGGAGGAGGA TTCCGAGCTG
TGCCTGCCGG CGATGAAAGC CGGACTGAAT TTCATCCGGC TGGCGACGCC GACCACCGAC
GAAAAGCGGT TGCCGGCAGT GCTCGCCAAC ACCTCGGGCT TCGTCTATTA CGTGTCGATC
ACCGGCATCA CCGGCTCGGC TTCGGCGGAT TCGGCCGCAG TCGGCGACGC GGTGGCCCGG
ATCAAGCGCC ACACCGACCT GCCGGTCTGC GTCGGCTTCG GCATTCGCAC CCCGGAAGCG
GCGCGGGCGA TCGCCGCGGA GGCCGACGGT GCGGTCGTCG GATCGGCGCT GATCGACGCG
CTGCAAAAGA GCCTCGACGC CGACAACCGC GCCACCAAGG CGACCGTCGG TGCGGTAGCG
GACCTGGTCG CCTCGCTGGC GGCGGGCGTT CGCGGCGCCA AACAGGCTGC GGAATAG
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| Protein sequence | MTTRIDTRFA ELKKQGRSAF VTFVMAGDPD LATSLQVLKA LPAAGADIIE IGMPFTDPMA
DGPAIQAAGL RALHSGATLS HTLGLVRDFR KDDDTTPMVL MGYYNPIYIY GVDAFLADAK
AAGVDGLIIV DLPPEEDSEL CLPAMKAGLN FIRLATPTTD EKRLPAVLAN TSGFVYYVSI
TGITGSASAD SAAVGDAVAR IKRHTDLPVC VGFGIRTPEA ARAIAAEADG AVVGSALIDA
LQKSLDADNR ATKATVGAVA DLVASLAAGV RGAKQAAE
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