Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0028 |
Symbol | |
ID | 4020482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 35342 |
End bp | 37240 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637960204 |
Product | hypothetical protein |
Protein accession | YP_567169 |
Protein GI | 91974510 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTCA TTAACCGATC AACCGCCGTC CGCCGGCCGT TGGCTTGCAG GGGCCCACTG TGGACGGATG AGCCGGCTTA CGCACGCGCA AACCGGCTTG CCCTGATGAA CGGCATCAAT TCGTTGGCCT CGTTCGGAGG CGAGATGAGA ATCCCGTATC GACAGATCAT TTGGGGTTGG CGTAATGCCG AGATAGCCGC TCTCGCCGGC ATGGACCCGG CCAATCTCGG CGCTGTGACG TTCCGCGTCG GTGACGACGA CCGGGTTCGC CTCGGCGACG AGGTGCTGCA CATCGATGAC TGGTCGTATA ATGTTCTGCG GGTTTGCCCG GCTTGTCTTC GCAGCGATTT CGAGCGAGAG AGCCGGTTTC CGGATTTGCT GCCTCACATC AGGTCGTGGT GGAATCTCGA TGCGATCGAG GTGTGTCCGC TTCATCGGAC GCCATTGCTC GGCGGAAATC CGGATATCTT CGGCCACCGG AACGATCCCA AGATTCTTGA CGTCCGCTTC GTTGCCGGTG TCGACTGTGA CCTGTCCAGT TTGCAGGTCG AGGTCGGCAT CGTCGAGGAC GTTCGGGCGG AGAGCTATAT CTTGGGGCGT TTGGGATTCA TGCCCCGGGT CAGATCTGAA ATTTTGGACG ACCTGCCGCT CTGGAATGCC ATTCGCCTGA TGGACCGCTT TGGAGCGGTG GCCGCCGCCG GTGTCCGCGG CTTCACCTCG CTGGGTGGCA GCGTCTCCAA GCGCGAGGCT CTGTCGGCCG GCTATGCGGT GTTCGCCGAC GGCAAGGACG GCCTCTTCTG CCTGCTCGAC CGGCTCGTCG CCGACGCCGA CGTCGCTCGC GGAAAATGGG GACCGCGGGT CGCCTACGGG CGGATTTACG AATGGCTTTC GCATGACACC CGCGAAGAGG CCTACGACCC TGTCCGCGAG CTTGTGCGCC AGCATGCGAT CGACAATATC CCGATGGCTG CCGGCGACCT GGTCTTTGAC CGACCGATCG GGGACCGCCA TGTCTTCACT TTGTGGCATG TCAGCCGGGA GCTCAAGACG ACCCCATCGG CAACTCGGCG AATTTTGAAG GCGATGGGGC ATCTCTCTCC GGACGACGAC GTCAAAGAGA ACTGGCAGGT GCTGCTTCGC AAGCCGGTGG TCGACCAGGT GACAGCCGAC CTTGCGGACT GGCTCGGTTT CAACGAGGCT CGCGCTTTGC TCGGCCTTCC CCGAGCGCCG ATGGACGCCT TGCTCCAATC TGGCGTCCTG AAAGCGTTCC TCTCCGTCTC GACCGGCGTC GCCGAGCACA TATTCCGGAG GCGTGACCTC GATGCGTTCA TGACCAGCTT GGTCGGCGGT GCGCCATTTT CCCGGAAGAC CGAGGGCCTT TGCGATGTCG TTCAGGCGGG CCGGCGCAGC GGGACGTCGA CCACCGACGT CGTTGCCGCC TTGCTGGCCG GCCGCCTGAC CTGCTGTGGC CGTCTCTCCT CGGCGACCGG TATGATGCAG GTGCTGGTGG ACATCGAAGC CGTCAGGGCA CTGCGGGCGT CAGGCGAGGT GAGACGCCCC GGGATGACCG TTGAGGACGC CAGGCGCAAG CTTGGCGTCA CTTGGCCAGT GGTCAGCAAC CTGATCGGTC TCGGCTTGAT CAAGACGATC GAGACCCGGG CCGGACCTAA GAACCGGAAG CAGTCTTTTA TTGAGGATAG CGAATTGGAG GCGTTCACCG CGGAGTTCGT ATCCGCAACC GAAATCGCGG AAGCGCGTAA GACGCATGTG CGCGTGCTGG TACCGGCGCT CCGAAAGCAA GGCATTGAGC CCGCGATCGA GAAGACCGCT GTAGGACAAT ATTTTTACAC GCGCGAGAAA TTTACGCTGT CCAGGGCAGT CGTCGAGAGC GAACATTGA
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Protein sequence | MNVINRSTAV RRPLACRGPL WTDEPAYARA NRLALMNGIN SLASFGGEMR IPYRQIIWGW RNAEIAALAG MDPANLGAVT FRVGDDDRVR LGDEVLHIDD WSYNVLRVCP ACLRSDFERE SRFPDLLPHI RSWWNLDAIE VCPLHRTPLL GGNPDIFGHR NDPKILDVRF VAGVDCDLSS LQVEVGIVED VRAESYILGR LGFMPRVRSE ILDDLPLWNA IRLMDRFGAV AAAGVRGFTS LGGSVSKREA LSAGYAVFAD GKDGLFCLLD RLVADADVAR GKWGPRVAYG RIYEWLSHDT REEAYDPVRE LVRQHAIDNI PMAAGDLVFD RPIGDRHVFT LWHVSRELKT TPSATRRILK AMGHLSPDDD VKENWQVLLR KPVVDQVTAD LADWLGFNEA RALLGLPRAP MDALLQSGVL KAFLSVSTGV AEHIFRRRDL DAFMTSLVGG APFSRKTEGL CDVVQAGRRS GTSTTDVVAA LLAGRLTCCG RLSSATGMMQ VLVDIEAVRA LRASGEVRRP GMTVEDARRK LGVTWPVVSN LIGLGLIKTI ETRAGPKNRK QSFIEDSELE AFTAEFVSAT EIAEARKTHV RVLVPALRKQ GIEPAIEKTA VGQYFYTREK FTLSRAVVES EH
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