| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3599 |
|---|
| Symbol | |
|---|
| ID | 4020156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 4313467 |
|---|
| End bp | 4314312 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637957660 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_564597 |
|---|
| Protein GI | 91794946 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC ATATTGCAAG TATGTTGCTA GGGGCCTTGT TGCTCAATGT GGGCTGCAGC
GCGATTATGA GTGAAAAAGG ATTTATCACC CAAGATAAGC AAGTCACCCA GTTTAACACT
GAGTATATTG AGAAATTAGC ACAATCCCTG CCTCAACACA TGGTCAATCA GATCAGTATT
GATGGCGATG AGCAAGTCAG CTTAAAAGGT TTATTTATCG ATAATCCAAA TAGCCATACC
CTGGTATTTT TTATCCAAGG AAATGGCATG AAAGTTGACC CCGATAGTTT AGCCGTACTA
CTGACCTTGT CTCAGTTAGG AACGGATATA GCCATATTCG ATCGTCGAGG CTTAGGTGCA
AGTAATGGCC AAGCCACTAT CGCCAATCTG TTAACTGATG CCATCCAAGA ATTAACCTTT
ATTCGTCACA CCTATCAGCC AGATAAAGTC ATTGTTCATG GGTATTCGCT AGGCAGTTTT
ATCGCAGCTC AGCTAGTAAA AAATCAAGCC GCCGATGCAT TAGTGATGCA AGGCTCGGCT
ACCAATGTGG ACGATTGGAT AGCCACTAAA ATCCCTTGGT ATATGCCTTT TCTAACGGTA
GAAACCCCTG AGTCATTCAA GCTTGTGGAT AATCAGGAAG TCGTCTCAAA ATTTTATCAG
GGTCCATTAA TGGTCATCGG CGCTGAGAAA GATGATCAAG TCCCAGCTGA GTTATCTGAA
AAGCTATTCT TGGCAAGTCA GTCAAAAATT AAATCATTAA TTATTGTACC CAAAGCGAAC
CATGGTGAGA TGCTAAATTC AGCCAAGACC ATGCAAGCTT ACCGAGAATT TCTAGCCCGA
ATATAG
|
|---|
| Protein sequence | MNKHIASMLL GALLLNVGCS AIMSEKGFIT QDKQVTQFNT EYIEKLAQSL PQHMVNQISI
DGDEQVSLKG LFIDNPNSHT LVFFIQGNGM KVDPDSLAVL LTLSQLGTDI AIFDRRGLGA
SNGQATIANL LTDAIQELTF IRHTYQPDKV IVHGYSLGSF IAAQLVKNQA ADALVMQGSA
TNVDDWIATK IPWYMPFLTV ETPESFKLVD NQEVVSKFYQ GPLMVIGAEK DDQVPAELSE
KLFLASQSKI KSLIIVPKAN HGEMLNSAKT MQAYREFLAR I
|
|---|
| |