| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3473 |
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| Symbol | |
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| ID | 4020027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4157388 |
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| End bp | 4158197 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957531 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_564471 |
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| Protein GI | 91794820 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAC AAAAATTATT GAACACATCT CTGAGAAGCA AAAACTTTGG AAACAAAATT
TTTAAAAACA ATGGCCTGAG CAACAAACAA ACCCGTCAGT TACGCCGCCT AATCACAGCA
ATTAGCCTGA CTAGCATGAT GCTGATAAGC CCTTTGAGCC TAGCGCAATC ATCTAGCAGT
ATTGCCGCCA TAGATAGCGC CGCCAATAGC ATGAATCTTG CAGGTTTAAC CCGGCTAAGC
CAAGGAACGG ATGCGAGTTA TGCCACTGCC TATGCCAACT ATCGCCTAGC CATTAGCGCC
AATATTCTAG GGCAAAGAAA TACCGCCACC CAAGCCCTAG GGCTTGCACA AACCCAGTTA
GAGCAGATAA TCTCAATCGA AGCAGCACCT GAACCATTAG CCTTGCTGGC AAGCGTCTAT
GGCATGCAAA TCGCTTTTGA CAGCAGTAAA GGCGCCACTC TTGGGTTTAA AATATCGACC
CTGTTAACCC AGGCTAGAGC ACTGGCTGCC GATAACCCCA GGGTGGCGTT AGTGGCGGCG
ATCAGCGCCT TTAATACCCC AAGTTTATTT GGGGGTGGTA TGGATAAGGC CATTAGCTTA
AGCTCACAAG CCATTGAATA TTATGCAATG CCCTGTGATG ATATCTGTTG GGGCCATGCC
GAAGCTTACA CTTGGCGAGG GCTGGCGAAA CAAGAGCAAG GTGATATGAC TGGAGCCATC
GCAGATTGGC AGCAAGCGTT AACTGTGGAT GCCAATTATG GCTGGGCGCA ATTTCTGCTA
TCCCAACATA AGCAAAGCGC AGCAAACTAG
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| Protein sequence | MNTQKLLNTS LRSKNFGNKI FKNNGLSNKQ TRQLRRLITA ISLTSMMLIS PLSLAQSSSS
IAAIDSAANS MNLAGLTRLS QGTDASYATA YANYRLAISA NILGQRNTAT QALGLAQTQL
EQIISIEAAP EPLALLASVY GMQIAFDSSK GATLGFKIST LLTQARALAA DNPRVALVAA
ISAFNTPSLF GGGMDKAISL SSQAIEYYAM PCDDICWGHA EAYTWRGLAK QEQGDMTGAI
ADWQQALTVD ANYGWAQFLL SQHKQSAAN
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