Gene Sden_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2104 
Symbol 
ID4018596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2501440 
End bp2502159 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content44% 
IMG OID637956128 
Producthypothetical protein 
Protein accessionYP_563109 
Protein GI91793458 
COG category[S] Function unknown 
COG ID[COG2859] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATAA GTAACAAATT TAACAGTAGC ATTTTTGGGG TTTTCCTGTT GCTTGCCATG 
GCAGTCTTAG GGTTGACCTT GAAGCAAGCC ATAGTGGAAT ATAAATTACT CGACCGTAGC
GTGACAGTGA AAGGCTTAGC GGAAAACGAG TACCCTGCCG ATATCGTCAT CTGGCCAATT
CAATTTACGG CAGCCAGTAA CGATCTCGAA GCCCTTTACG TGCAACTCGA TACGCAGAGT
CAGCAGGTGG TCAATTTTCT TAAAAGTAAT CACCTCTCAG GTGAAGAAAT CAGCCTATCG
ACCCCGAGGA TCACAGATAA ACTGGCACAG GAATATGGCG GCAACGAACA ATCCAAATTC
AGGTACACTG CTCTGCAAAC CATTACGGTT TACTCCACTA ATATCACACT AGTGCGGGCC
ATGATGCCAA GGCTTTCTGA ACTGGGGAAA ACTGGTATCG CCTTTTCTCA GGCGGATTAT
GATGCGCAAG TCGAATACAT CTTTAGTCGC CTTAATGAAG TAAAACCACA GATGATTGAA
GAATCCACCA CCAACGCCCG AGTGATAGCC GAAAAGTTTG CCAACGATTC TAAGAGTCAA
TTAGGCAAAA TAAAGAAAGC CGCTCAAGGT CAGTTCTCCA TCAGCAACCG TGACAAAAAT
AATCCACATA TTAAGCGTAT ACGAGTGGTG TCCACCATAG AATATTATCT AGCCGATTAG
 
Protein sequence
MTISNKFNSS IFGVFLLLAM AVLGLTLKQA IVEYKLLDRS VTVKGLAENE YPADIVIWPI 
QFTAASNDLE ALYVQLDTQS QQVVNFLKSN HLSGEEISLS TPRITDKLAQ EYGGNEQSKF
RYTALQTITV YSTNITLVRA MMPRLSELGK TGIAFSQADY DAQVEYIFSR LNEVKPQMIE
ESTTNARVIA EKFANDSKSQ LGKIKKAAQG QFSISNRDKN NPHIKRIRVV STIEYYLAD