Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1382 |
Symbol | |
ID | 4017745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1605201 |
End bp | 1605884 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637955379 |
Product | regulatory protein GntR, HTH |
Protein accession | YP_562391 |
Protein GI | 91792740 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000764152 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAG CCTCTGAATC ACCTCAACCC ATTGTTCATC AAACTCGCAC TCAAGTCGTG TTGAAAGTCA TCCGAGAATG GATTTTATCT GGCCAAATCA AAGGCGGTGA ACCCTTAAGG CAGTCATACA TTGCCCAAAA GTTAAATGTG AGTCGAATTC CTGTTCGTGA AGCCTTGGTA CAGTTGGATG CAGAAGGCTT AGTTAACTTT GAGCCTCATA AAGGTGCGAC TGCCACCCTA TTGTCTGTGG AGCAAGTGAC CGAGCTTTTT GAGCTCAGGG CCATGATTGA GGTCGATTTG CTTGCAAAAG CTATCCCGAA TCTGCAAGAT GTTCACCTTA TAAAGGCACA GAGTGTCTTA GATCAGCTAG AGCTGGCTTT TAAACTAGAA AGTTCTGTAG CAACTTGGAG CGAATTAAAC AGACAATTTC ATACCTGTTT ATACCAAGCG GCTAACCGCC CTCATACATT AGAGGTTGTT CAAGGCTTGA ATATCCATAG CGATCGCTAT ATTCGCTTGC AACTTTTACA TACTGGGGGG ATCCCGACTG CCGAACGAGA GCATAGGGCC TTACTTGAGC TGTGCCAGTG CAAAGATATT GCCGGCGCCA GTGAATTATT ACATCAACAT ATTATTGGTG CACTAGCGGC AATTAAAGCC TTAGTTGAAA AACAAGTGAA CTAG
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Protein sequence | MNLASESPQP IVHQTRTQVV LKVIREWILS GQIKGGEPLR QSYIAQKLNV SRIPVREALV QLDAEGLVNF EPHKGATATL LSVEQVTELF ELRAMIEVDL LAKAIPNLQD VHLIKAQSVL DQLELAFKLE SSVATWSELN RQFHTCLYQA ANRPHTLEVV QGLNIHSDRY IRLQLLHTGG IPTAEREHRA LLELCQCKDI AGASELLHQH IIGALAAIKA LVEKQVN
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