| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0872 |
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| Symbol | |
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| ID | 4016973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 996624 |
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| End bp | 997736 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954862 |
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| Product | permease YjgP/YjgQ |
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| Protein accession | YP_561883 |
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| Protein GI | 91792232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000506114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGTAT TTAGATACCT GATAGCTGAA GTTTTAAAGG CACAATTTGC GGTACTTTTA
GTGCTGTTAA CTATTTTTAT TAGCCAACAA TTTGTTCGAG TATTAGCTGA CGCCTCAAAT
GGCGAGTTTC CTGCCTCTTT AGTCCTGACT TTATTGGGAT TGAACTTGCC CCAATTAACC
TTACTCATTT TGCCATTAAG TTTCTTTTTA GGGATTTTAT TGGCTCATGG ACGCATGTAC
GCCGAAAACG AAATGGTGGT GCTTCACAGC GTTGGCGTGA GTGAATGGTA TGTGGCTCGT
GTCACCTTAT TAATCGCGTT AGCTAACTTA GTGTTTACCT GCGTGCTATC CATGTATGTG
AGCCCTTGGG CGGAAGAAAG GCAGAATCAA GTATTAGAAA AAGCCCAATC TGAAGCAGGA
CTTGCCGCCT TAGTGCAAGG ACGATTCCAG GCAAGCCCCA ATGGCCGCGC CGTGTTGTTT
GTGGAAAAAA TTAGTAAAGA CAATCAATTG AGTAAAGTGT TCGTTGCTCA GTTACCGGAT
CCCGACGATA AAGAAGGCAT GAGTAATGTT GTCGTCGCCC AGCAAGGGCG AGTGATAGAA
GACAGTATTG GCAGTCAACA GTTGCAACTG GAGCGTGGGG TGCGTTACCA AGGCAGTCCG
CAAGGGCTGG CCTATCAAGT CATCGAATTC GGTGGTTACC GAATGGAGAT AAAAGAGCAA
GAAGTGGATG AGCGTCGGCG CAAATTGTCG GCCCTGTCGA TGGAGCAACT CAATGACACC
CAAGGTCCTG AAGCCGCGGC AGAGTTTCAT TGGCGTTTCG CTATTCCATT ATCTATCCCA
TTATTAACCC TGATTGCCGT GCCGCTAGCT AGAGTGAATG TACGCCAAGG TAAATTTGCC
AAAATGTTCC CAGCGATTTT ACTCTACTTG GGTTATTTCG GCCTGATGAT CGCCGGTCGT
AAGGCACTAG AAGATGAAGT GATACCTGAG TACTTAGGCA TGTGGTGGAT CCATATTTCT
GTCTTGCTCA TGGGCGTATT CCTCCTAGGT AAAGAGCGGC CGCTATTTGT GAAATTTTCC
TTGTCGCTGA AAAAGAATAA GGTGCCAGCA TAA
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| Protein sequence | MIVFRYLIAE VLKAQFAVLL VLLTIFISQQ FVRVLADASN GEFPASLVLT LLGLNLPQLT
LLILPLSFFL GILLAHGRMY AENEMVVLHS VGVSEWYVAR VTLLIALANL VFTCVLSMYV
SPWAEERQNQ VLEKAQSEAG LAALVQGRFQ ASPNGRAVLF VEKISKDNQL SKVFVAQLPD
PDDKEGMSNV VVAQQGRVIE DSIGSQQLQL ERGVRYQGSP QGLAYQVIEF GGYRMEIKEQ
EVDERRRKLS ALSMEQLNDT QGPEAAAEFH WRFAIPLSIP LLTLIAVPLA RVNVRQGKFA
KMFPAILLYL GYFGLMIAGR KALEDEVIPE YLGMWWIHIS VLLMGVFLLG KERPLFVKFS
LSLKKNKVPA
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