Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0339 |
Symbol | |
ID | 4020355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 378604 |
End bp | 379833 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637954320 |
Product | signal transduction protein |
Protein accession | YP_561357 |
Protein GI | 91791706 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0012225 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTTT ACACGGCAAG ACAACCTATT TTGAACCGAA GGCAGCGGGT TGTTGCTTAT GAATTATTAT TTAGAGACAG TTATAAGAAC TGTTTCCCTG TGGATGTGCC TGACAAGGTG GCTACGGCTA AATTATTGGT CAATAGCTTT TTGAGCATGG ATATTGAGGA TATGACAGAT GGCAAGCCTG CCTTAATTAA TTTCCCTACT AGCCTATTGA AAGAGCATTT AGTTCATATC TTGCCATATA AGAATTTAGT GATTGAAGTG CTAGAAACTG TGGAACCAAA CGATGATAAT TTTGCGATTT TAAAGCAATT ATTTGATTCA GGTTACCATC TTGCCTTGGA TGATTTTATT TACAGCCCAG CTTGGGATAG ATTCTTACCC CTTTTTAAAC TAATAAAAAT TGATATTGTT GCCACTCCTT TGGACACTAT TGCGCATATA TTGCCAAAGT TGAAACAGAA AAAGACCCGC TTGCTTGCAG AGAAAGTGGA GACACAAGCG GACTTTTTAC ACGCTAAAGC CCTAGGTTTC GATTATTTTC AAGGTTATTT CTTTTATAAA CCTGAAATTG TTAAAGGCAA TGAAGTCGAG CTGTCTCAGC CGTTTTTAAT GTCGATTTAC ACGGAAGTGA TGAAGCCTAG TTTTAGTTAT CGAAAATTGG AAGCTTATTT TACTCAAGAT ATGGATTTGA GCTATAAGCT ATTACGTTTT GTAAATTCGA GTTATTTTTC CCATGTGAAA GATATTATCT CTTTAAAGCA AGCGATGATT TTTCTAGGAG AAAATCAATT ACGCAAATTT GTCTGTCTTA TTGTGATGGC GCAGCTTAAT CCCGATAAAC CCCAAATCTT GATCCAAAAT ACTATGTTAA GGGCTAGATT GTGTGAAGTT ATCGCCAAGG TGATGAAGTT GAATAAACTG GCGGATGCCG CGTTTTTAAC CGGACTATTC TCAACCTTGG ATGCCATTCT AGATAAACCC ATGGAAAAGG TGTTGCACTC GCTGCCATTA GCGCCAGAAA TCAATAATGC CTTATTGCAT CAACAGGGTG AGCTGGCTGA ATGTTTAGCC TTGGCCATCG CCTATATGCA AGGGAATTGG GAATTCGTGT CTGAGTTCGT GAGTCGTAAT CACATTAACG CCGGTGAGTT AACCCGCCGA TGTAACCAAG TCTATCTGTG GTTGTCCGAA TATCAGCGTT CATCTTCATC AAAAGCTTAA
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Protein sequence | MHFYTARQPI LNRRQRVVAY ELLFRDSYKN CFPVDVPDKV ATAKLLVNSF LSMDIEDMTD GKPALINFPT SLLKEHLVHI LPYKNLVIEV LETVEPNDDN FAILKQLFDS GYHLALDDFI YSPAWDRFLP LFKLIKIDIV ATPLDTIAHI LPKLKQKKTR LLAEKVETQA DFLHAKALGF DYFQGYFFYK PEIVKGNEVE LSQPFLMSIY TEVMKPSFSY RKLEAYFTQD MDLSYKLLRF VNSSYFSHVK DIISLKQAMI FLGENQLRKF VCLIVMAQLN PDKPQILIQN TMLRARLCEV IAKVMKLNKL ADAAFLTGLF STLDAILDKP MEKVLHSLPL APEINNALLH QQGELAECLA LAIAYMQGNW EFVSEFVSRN HINAGELTRR CNQVYLWLSE YQRSSSSKA
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