| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0063 |
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| Symbol | fliP |
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| ID | 4017186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 71500 |
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| End bp | 72189 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637954036 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_561083 |
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| Protein GI | 91791432 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAGCAA CTCAAACATT AAATGAATGG CTGCCACACT TATTGGATAA ACCTTGGTTA
GATAGCTTGG CACCAGAACT AAGAATTGTT CTTGCTGTTA GTAGCTTGAC ATTGATTCCT
GTTTTTGTCA TCGCAATGAC CGCCTTTACA CGGATTATTA TAGTGCTGTC ATTAGTCAGG
CAAGCATTAG GTTTACAGCA AACTCCGCCA AACAGTGTCT TAATTGCTCT TAGTTTATTT
TTAACTATTT TTGCTATGAG TGGCGTATTT GAACAGATTA ATAATAAAGC ACTGCTTCCT
TATGCTAACG GCTCCATTGA GTTAAGTGCT GCTGTGAGTA ACGGCATTGA ACCACTGAAG
GGGTTTATGT TGTCGCAAAC GGATGAGGTT CATTTCATTA GAGTATTGGA TATGGCAAAA
GTGCCAGTGC CACAATCTTC AGCGGATGTA TCCTTGACGC ACTTAGTCCC TGCGTTCATG
TTATCGGAGC TAACATTAGC TTTTAAGATG GCATTCCTCA TTTTTCTTCC TTTTTTGATG
ATAGATTTAC TCGTCGCTAG CTGCTTGATG GCTCTGGGTA TGATTATGGT CCCGCCGATT
ACAGTATCAT TACCATTGAA AATTATGGTT TTTGTGCTTA TTGATGGCTG GTCATTAATC
ACTGGATCTT TAGTGCAAAG TTTTATGTGA
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| Protein sequence | MVATQTLNEW LPHLLDKPWL DSLAPELRIV LAVSSLTLIP VFVIAMTAFT RIIIVLSLVR
QALGLQQTPP NSVLIALSLF LTIFAMSGVF EQINNKALLP YANGSIELSA AVSNGIEPLK
GFMLSQTDEV HFIRVLDMAK VPVPQSSADV SLTHLVPAFM LSELTLAFKM AFLIFLPFLM
IDLLVASCLM ALGMIMVPPI TVSLPLKIMV FVLIDGWSLI TGSLVQSFM
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