| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1962 |
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| Symbol | |
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| ID | 4007542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1207018 |
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| End bp | 1208193 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637950740 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_553370 |
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| Protein GI | 91778162 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.350651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.328983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA CCGCCTTGGC CGCAATCGTT CTCGCAAGCT CCTCTGGCGC AGCGCTGGCG
CAAAGCAGCG TCACGTTATA CGGCATTGTT GACGAAGGCT TCATGATCAA CACAAACGCT
CACGGAGCCC GTCAGTACGG CCTTGTCAGC GGTAGCGAAT CGGGCAGCCG CTGGGGCCTC
AGGGGCTCCG AAGATCTCGG GGGCGGCCTG AGTGCGATAT TCAACCTGGA AGGAGGCTTC
AATTCCTCCA CCGGAGCACT GGGGCAGAAC GGCGATATCT TCGGACGACA GGTCTATGTC
GGACTTGCCG CGCCGACATG GGGCCAGCTG ACTTTCGGCC GGCAGTACCC GACCGGCTAT
GACTACGTCG GCAGCCTGAC TGCTTCGCCG CAATGGGCGC TCGGCGGCGC TGGTTATGGC
GCACATCCGG CAGATCTCGA CAATCTGGAC GGCACGTACC GCGTCAATAA CGCGGTGAAA
TACAAATCGC CGTCTTTCAG CGGATTTTCA TTCGGTGCGC TGTACTCGTT TGGCGGCGTG
GCAGGCAGTT TCTCGCGCAA TCAGATCTAT TCAGTCGGCG CCGGCTACAC CTACGGTCCG
TTTGTGCTCG CCGCCGAGTA CACCGATGTC AGGAATCCCA ACTTCTCACT GTGGGGCAAT
AAGGCCAACG ACAGCACGAC AGCATCCAAT ATGTCCGGGC CCGTGATTTC CGGCCTCGCT
ACGGCAGGCT CGCAAGACGT GGCCGCGGTC GGAGCGAACT ACAAGCTCGG CAGCGCGACG
TTCGGCCTCG TCTACAGCCA CACGTCGTTC AACGACCTCG GCACGACAAC GGTAAGCGGG
CTGACTGGCG CCCGCCTGCG CGGAACCGCT GTGTTCAACG TGATCGAAGC CAACGCGAAA
TACATGCTCA CGCCGGCCTT GCAACTTGGC GCCGCCTACT CCTATACCGC TGGCGGAAGC
CTGGGCGGAC GATCTGGCGC CCGTTACAAC CAGGTCGACC TCGGCCTCGA TTACAACGTG
TCCAAGCGTA CGGATCTCTA CCTCGTGGGC GTCTATCAGG TTGCGTCCGG CCACGACTCG
ACGGGCGCCG ACGCGGTCGC GCAAATCGCA TTTGCGACGG CATCCACGTC CAATCGCCAA
CTGGTGGCCG TTGGAGGCAT CCGTCACAGG TTCTGA
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| Protein sequence | MKKTALAAIV LASSSGAALA QSSVTLYGIV DEGFMINTNA HGARQYGLVS GSESGSRWGL
RGSEDLGGGL SAIFNLEGGF NSSTGALGQN GDIFGRQVYV GLAAPTWGQL TFGRQYPTGY
DYVGSLTASP QWALGGAGYG AHPADLDNLD GTYRVNNAVK YKSPSFSGFS FGALYSFGGV
AGSFSRNQIY SVGAGYTYGP FVLAAEYTDV RNPNFSLWGN KANDSTTASN MSGPVISGLA
TAGSQDVAAV GANYKLGSAT FGLVYSHTSF NDLGTTTVSG LTGARLRGTA VFNVIEANAK
YMLTPALQLG AAYSYTAGGS LGGRSGARYN QVDLGLDYNV SKRTDLYLVG VYQVASGHDS
TGADAVAQIA FATASTSNRQ LVAVGGIRHR F
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