Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A3589 |
Symbol | |
ID | 4002681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 968355 |
End bp | 969095 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637946053 |
Product | putative short-chain dehydrogenase/reductase SDR |
Protein accession | YP_557452 |
Protein GI | 91782246 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.377487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTGA CGGAAGAAAA GGGCGCGTTG CCGCCGGACT TATCGCGCGC CAGAACGGTA ATCGTCACGG GAGCGGCTGG TACGCTGGGC CGGGCCGTTG CCAAAGCATT CGGCGGTGTG GGCGCGAATC TGGTGCTGAT CGATCGCGAG GAAAGCGCGT TGCGCAGCGC GTTCGATAAC GCAGGCGAGA ACATGCTGTT ATGCGCAGCG CGGCTGGATG AGCCCGCTGC GGCGATACCT GTCGTTGAGC AGGCGGTCGA ACGATTCGGC GCGATAGACG TGCTATGCAA CGTCGCAGGC GGATTTTACG CAGGCGATTG CGTGCACGAA ATGCGCGATG AAACCTGGGA TCTATTGACG AATACGAATG CTCGCACCGT ATTGCATATG GCACAGGCTG TCATTCCAAA GATGATCGCC GCCCGGTACG GCAAAGTCAT AAACGTTGCT GCTATGGCCG CGCAGGCCGG AATGGCGCAT ATGGGCGCCT ATTGCGCATC GAAAAGCGCC GTGCTTCGGC TGACTGAGGC TATGTCGGCA GAGCTTCGCG GTCATGGCAT CAACGTGAAC TCGGTCATGC CGAGCATCAT CGACACTGCG CAGAATCGCA AAGACATGCC GGACGCCGAT TTCGCAACCT GGGTCAGGCC GGTGGATCTC GCCTGCATCA TTCTGTTTCT TGCATCCGAT GACGCACGCG CAATTCACGG CGCAGGAATT CCTGTCCGCG GAGCCAGTTA G
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Protein sequence | MIVTEEKGAL PPDLSRARTV IVTGAAGTLG RAVAKAFGGV GANLVLIDRE ESALRSAFDN AGENMLLCAA RLDEPAAAIP VVEQAVERFG AIDVLCNVAG GFYAGDCVHE MRDETWDLLT NTNARTVLHM AQAVIPKMIA ARYGKVINVA AMAAQAGMAH MGAYCASKSA VLRLTEAMSA ELRGHGINVN SVMPSIIDTA QNRKDMPDAD FATWVRPVDL ACIILFLASD DARAIHGAGI PVRGAS
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