| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5289 |
|---|
| Symbol | |
|---|
| ID | 4016248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007950 |
|---|
| Strand | + |
|---|
| Start bp | 42716 |
|---|
| End bp | 43789 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637944914 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_552046 |
|---|
| Protein GI | 91791096 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.975087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTATTTC GTCAATCAGG AATTTCCCAT ACCAGTTACG CCAACACGCG CTCGCTTTTC
CCGATCCCCG CGGATCGCTG GATGATCGGC TTGTTGCTGG CCTTTGCGTT AACTGCGCCA
TTTACCATGA GCTCGCTCGT CCTCAGCACC CAGCTGTTAC CGTGGCTGGT GTGGACTTCG
GCCGTGCTCG GCTTGAACCT GATCCTGGGT TGGGCCGGTC AGTTCCACTT CGGCTATGCC
GCCATCATGG GCATCGGTGC CTACACGGCG GTGCACGGCG CACGCAACGG CATTCCCTGG
GAAATCGCGG TGGTGCTCGG CGGCGTGATG GCCTCTGTGA TCGGCATCGT TTTCGCTTTC
GCGGCGCTGC GCGTGAAAGG CCTGTATCTG GCGCTCAGCA CGCTGGCGCT GCAGTTCGTG
ATGGACTGGG TGATCTCCCA TGTGCCCGCG ATCAGCGGCG GCTCCCAGGC CACGCTGCAA
GCACCCGCGA TGCGCTTGCT CGGTCAGACC GTCACTTCAG AGAGCGGCTT GTACTATATG
GCGCTGGGCT GGTGCCTGCT CGTGACCGTC TTCATGCTCA ATCTGCGCCG CACCGGGCTT
GGCCGCGCGC TCGTTGCCGT GCGTGAAAAG GACTTCGCCG CAGCAGTCAT CGGCGTACAC
AGCCTGTATT ACAAGCTGGT GGCATTCGCC ACCTCGTCCT TCATCGGCGG CGTCAGCGGC
GCTATCCTGA TTTTCACCTT CTACCGGGTG GCGACACCGG AGCAATTTGC GGTCAACGTG
TCGATCGAAT TGCTGGCCAT GGTGATCGTC GGCGGACTGG GCAGCATCAT CGGCAGTTAC
TTTGGGGCCG CCTTCATTCT ATTGATGCCC GGCCTGATGA ACAGCCTGAT CGCCTGGCTG
GCGCAGCTCA TGGGAATCTC GCTCGGCGTT GAAACGCTGG CCCACATTCC GCATGCGGTT
TATGGCGCAC TGATCATTAT CTTCCTGCTG GTCGAGCCGA TGGGCCTGGG CAAGATGTAC
ACCAATCTGC GCAACTACCT GCTGGTCTGG CCCTTCGGCT ACGCCCGAAA GTAA
|
|---|
| Protein sequence | MLFRQSGISH TSYANTRSLF PIPADRWMIG LLLAFALTAP FTMSSLVLST QLLPWLVWTS
AVLGLNLILG WAGQFHFGYA AIMGIGAYTA VHGARNGIPW EIAVVLGGVM ASVIGIVFAF
AALRVKGLYL ALSTLALQFV MDWVISHVPA ISGGSQATLQ APAMRLLGQT VTSESGLYYM
ALGWCLLVTV FMLNLRRTGL GRALVAVREK DFAAAVIGVH SLYYKLVAFA TSSFIGGVSG
AILIFTFYRV ATPEQFAVNV SIELLAMVIV GGLGSIIGSY FGAAFILLMP GLMNSLIAWL
AQLMGISLGV ETLAHIPHAV YGALIIIFLL VEPMGLGKMY TNLRNYLLVW PFGYARK
|
|---|
| |