| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5126 |
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| Symbol | |
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| ID | 4016087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 237960 |
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| End bp | 239126 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637944759 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_551891 |
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| Protein GI | 91790940 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.189049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA AGTTTGCAGC CCTTATCCTA CTGGCGTCAT TTGCCAACGC TGTGCTCGCA
GCGGACAACG TGAAGATTGG ATTCCTCAGC ACCTTGTCCG GACCGATCGC ATCACTCGGC
CTCGAGATCC GCGATGGTTT CAACCTGGCG CTGAAAAACA GCGGCAATAA AGTAGGCGGA
CTGCCCGTAG AGGTTGTGTT CGGTGACGAC CAGGCCAGCC CCGATGTCGG CAAACAGCTC
GCCGACAAGA TGATCAAGCG CGACAAGGTC GACTTCATGA CCGGCGTTGT TTACTCCAAC
GTAATGCTCG CGGTCGGACC ACCGACCTTT GCCGCGCAGA CCTTCTATAT CAGCTCGGCG
GCCGGTCCGG CCGCGCTGGC GGGCGAGCGC TGCAACAAGT TCTTCTTCGG GCTGTCCTGG
CAGAACGACG GGCAAAGCGA GGCGGTCGGC GAATACATGA CGACCAAAAA CTACAAGAAT
GTGTTCATCA TTGCGCCCAA CTACACCGGC GGCAAGGAAA ACCTCGAAGG CTTCAAACGC
TTCTTCAAGG GCAAGATCAG CGGCGAAGTC TATGTGAAGC TTGGTCAGCT CGATTTCGCC
TCCGAACTGG CGCAGGTTCG CGCCGCCAAA CCCGATGCCG TCTTTTTCTT TCTACCGGGT
GGCATGGGCA TCAACTTCAT CAAGCAGTAC GTTGGCGCCG GACTGGACAA GCAGATTCCC
TATTTTGTGC CGGGATACTC GGCTGACGAA GACACCATCG CCGCGGTGGG CGATCCGATC
GTGGGCCTGA AAAACGGATC GCACTGGGCT TGGGACCTGA AGAACCCGCA GAACGAAAAG
TTTGTCGCCG ACTTCAAGAA GGAATACGGC CGCATTCCCA CCATGTATGC ATTCCAAGGC
TACGACGTGG TGCGGCTGCT CGACAGCGCT GTCAAGGATG TGAAGGGCAA CCTGAGTGAC
AAGGAGGCGC TGCACAAAGC GCTGAAGACC ACCAACTTCG GATCTCTGCG CGGTAGTTTC
AAGTTCAACA ACAACCAATT CCCGATGGAT ACCTTCTATC TTCGTGAAGT GCAGAAAGAC
AGCAGCGGTC GCATTACCAA CAAGACCATC GGCACGATTT TCAGCAACCA CGCCGACGCC
TATGCCGGTG AATGCAAGCT GAAATAA
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| Protein sequence | MKTKFAALIL LASFANAVLA ADNVKIGFLS TLSGPIASLG LEIRDGFNLA LKNSGNKVGG
LPVEVVFGDD QASPDVGKQL ADKMIKRDKV DFMTGVVYSN VMLAVGPPTF AAQTFYISSA
AGPAALAGER CNKFFFGLSW QNDGQSEAVG EYMTTKNYKN VFIIAPNYTG GKENLEGFKR
FFKGKISGEV YVKLGQLDFA SELAQVRAAK PDAVFFFLPG GMGINFIKQY VGAGLDKQIP
YFVPGYSADE DTIAAVGDPI VGLKNGSHWA WDLKNPQNEK FVADFKKEYG RIPTMYAFQG
YDVVRLLDSA VKDVKGNLSD KEALHKALKT TNFGSLRGSF KFNNNQFPMD TFYLREVQKD
SSGRITNKTI GTIFSNHADA YAGECKLK
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