| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4640 |
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| Symbol | |
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| ID | 4012681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4920855 |
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| End bp | 4922081 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637944289 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_551421 |
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| Protein GI | 91790469 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.132875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTA TTTTTGGTCG TTTCAGTCAT ATTTCAATAG CCGCCTCCCT GGTCGGCACG
GCCCTCTGGG GTGTCACCCC CGGCCTTCAG GCGCAGAATT TCCCCATCAC CCCCGGCCAG
AAGGCCACGG CCACCCAGGT TGCCGAGGCC GGCGTTCCCC TCAGCGAGCT GGCACCCAAT
GCGCCGGACG AGTACACCGT CAAGCGGGGC GACACGCTAT GGGCCATTTC GGGCATGTTC
CTGAAAAGCC CATGGCGCTG GCCCGAACTC TGGGGCATGA ACCTGCAGGA CATCCGGAAT
CCGCACCGTA TTTACCCCGG CCAGCAGCTT TACCTGGACA AGACCGGCGG ACGTGCCACG
CTGCGCGCAC GCCAGGCGGC AGACGGCCCG CCCACCGATA CCATCCGTGT CTCGCCCCGG
ACCCGCTCCG AAGCACTGGC TGACGCGGCG ATCCCGACCT TGCCGGCCAA TGTGATCGAG
CCCTTCCTGG CCGAACCCCT GATTGTGGAT GCAGCCACCT TCGCCACCGC TCCGCGCATT
GTGGCCGCCC AGGAAGGCCG CGTCCTGCTG AGTCGGGGCG ACCGCGCCTA CGCACGCGGC
GCTTACAGCG ATGGCGTCAC CGGCAAAACC CTGAGTGATG CCAAAGGCGA ACCGCTGGAC
TACCGCGTGT TTCGCAATGC CACGCCCCTC AAAGACCCCA CCACCAAGGA AATCCTGGGC
TACGAAGCCC AGTTTGTCGG CAAAGCCGAA CTGGTTCGCG GCGAATCGAG CCACAGCGCC
AGCAGCGACG GCAAGACGCC CGCCGAAATC GTGCCTGCCA CCATCGACAT CGTGGTTGCC
AAGGAAGAAA TGCGGGTGGG CGATCGCCTG ATTGCCGAGC CGCCGCGTGA ACTGCTCAGT
TACGTGCCCC ATGCGCCCGT CCTGCCGATG GAGGGCCAGA TCGTCTCTGT CTATGGCAGC
GCAGTCCAGT ACGCCGCAGA AAACCAGGTG GTGGTCATCA ACCGGGGCAT CCAGGACGGG
CTGGAGCGCG GCAATGTGAT GGCCATCCTC AAGAATGGCG AGCGCCTGAC CGATCGCACC
GATCAGGCCA AGCCCCAGAT CAAGCTGCCC AACGAGCGCA ACGGCCTGCT GATGGTTTTC
AAGACCTTCG ACAAGCTGTC CTACGCGCTG GTGCTGCAAA TCGTTGACGG CGTCAAGGTA
GGTGACCGTT TCGTCAACCC CAACTGA
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| Protein sequence | MQTIFGRFSH ISIAASLVGT ALWGVTPGLQ AQNFPITPGQ KATATQVAEA GVPLSELAPN
APDEYTVKRG DTLWAISGMF LKSPWRWPEL WGMNLQDIRN PHRIYPGQQL YLDKTGGRAT
LRARQAADGP PTDTIRVSPR TRSEALADAA IPTLPANVIE PFLAEPLIVD AATFATAPRI
VAAQEGRVLL SRGDRAYARG AYSDGVTGKT LSDAKGEPLD YRVFRNATPL KDPTTKEILG
YEAQFVGKAE LVRGESSHSA SSDGKTPAEI VPATIDIVVA KEEMRVGDRL IAEPPRELLS
YVPHAPVLPM EGQIVSVYGS AVQYAAENQV VVINRGIQDG LERGNVMAIL KNGERLTDRT
DQAKPQIKLP NERNGLLMVF KTFDKLSYAL VLQIVDGVKV GDRFVNPN
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