Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3025 |
Symbol | |
ID | 4014294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3191739 |
End bp | 3192416 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637942690 |
Product | GntR family transcriptional regulator |
Protein accession | YP_549837 |
Protein GI | 91788885 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.131059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAC TCAAAGAAAA ACCTGAACAG GGACTGCCGC TTTTCATTGC GGAAGAGCTC AAGCACCTGA TCTACACCGG CGCACTCAAG CCCGGCGAGC GCCTCAATGA AGCGGCGCTG GCGCTGCGCA TGGGCACCAG CCGCGGCCCG ATCCGGGAGG CCATCCGCGT GCTGACGGGC CTGGGCATCG TCAAGGCGGT GGTCAACCGC GGCGTCTTCG TGCGGCAGAT TTCAGTGCGC GAGATGCTGG AGATCTACGA ACTCCGGGCG CTCGTCTTCG GCTTCGCCGC CGAACGGGCC ACGGAACATA TCAACGAAGA GCACAAGCAG CAGTTTGAGC GGCTACTCGC GCAGATGGAT GCAGCCTGCG ACGCTGAAGA CGCCGATCTG TACTACGACC TGAACCTGCA ATTCCATGCG CTGATCCTGC GCCTGTCCAA CAACCAGCGG GCCCATGAAA CATATGACGA CTATGTCAAG GAGCTGCACC TGTTCAGGCG GCGCTACTTC AACTCGCCCG GCAACATGCG GCGCTCCAAC ATCGAGCACC GGAGCATCTA CGAGGCCATC GTCAAAGGGG CCAAAGCCCG GGCGAAATCG GCCGCTGAAC GCCATGTGCT GTCGGGACGG GAACGCCTGC TGGCCAGCAT CGATGACAGC AGCCCCCTGT CGTCCTAG
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Protein sequence | MTSLKEKPEQ GLPLFIAEEL KHLIYTGALK PGERLNEAAL ALRMGTSRGP IREAIRVLTG LGIVKAVVNR GVFVRQISVR EMLEIYELRA LVFGFAAERA TEHINEEHKQ QFERLLAQMD AACDAEDADL YYDLNLQFHA LILRLSNNQR AHETYDDYVK ELHLFRRRYF NSPGNMRRSN IEHRSIYEAI VKGAKARAKS AAERHVLSGR ERLLASIDDS SPLSS
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