| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2035 |
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| Symbol | |
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| ID | 4015299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2110661 |
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| End bp | 2111953 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637941707 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_548863 |
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| Protein GI | 91787911 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.789986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00327746 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTATGT CCCGCGTTGC CCAGTCTTCC CAGTCTTATT TCCCCCGCCA CTTCATGGGG
CTTCGGCCGC TGGCGCTCAT TGCCGCAGTT TCATTGCTTC TGGCCGGTTG CGGCAAAAGT
GGCAACGCGC AGGGCGGTGG CTCACCACCC CCCCCACAGG TCGGCGTGGT CACTGTGACG
CAGGGTGACG TTGCGCTGGT CACTGAACTG CCGGGAAGGC TTGAGGCCTC GCGGGTCGCC
CAGGTGAGGG CGCGGGCGGC GGGCATTTTG CAAAAGCGGC TGTTCCGTGA GGGCAGTGAC
GTGAAGGCTG GCCAGCCGCT GTTCAGCATT GACCCCGCGC CTTATGCAGC GGCCGCCGCC
AGTGCCAAAG CCAGCCAGGC GCGCGCTGAA GCCAATCTGG CGCAGGCCAC CGCACTGGCC
GAGCGCTACA AGCCCCTGGT CGAAGCCAAT GCCATCAGCA AGCAGGAATA TGCCAACGCC
GTGGCAGCCC AGAGGCAAGC CGAAGCCGAT GTGGCCATGG GCAAGGCCAG CGTGCAAACG
GCCAATATCA ATCTGGGTTA TGCCGCGGTG ACGGCGCCGA TTTCGGGCCG CATAGGTCGT
GCGCTGGTGA CGGAAGGCGC GCTGGTCGGC CAGGGCGACG CCACACAACT CGCGGTCATC
CAGCAGATCA ATCCCATGTA CGTCAACTTC ACGCAATCCG CATCCGAAGT GATGAAGCTG
CGCGCTGCCA TGGAGAGCGG GCAGTTCAAG CGCGCCAGCG GAGGAGATGC GGCCAGCGTG
CGCATTGTGC TGGAAGATGG CACCGAATAC CCACGTCCCG GCCGCCTGCT GTTTTCCGAC
CAGACCGTTG ATGCCACAAC GGGGCAGATC ACCCTGCGGG CTGAAGTTCC CAATCCGGGC
AGCCAGCTGC TGCCGGGCCT GTATGTGCGC GTACGCCTGG AGCAGGCCCA GGCCGCCAAC
GCCATCACCT TACCCCAGCA GGCGGTGACG CGCACGGCGC AGGGCGATAC GGTCATGGTG
GTCGGTGCGG ACGGAAAGGT CGCGTCGCGT ACTGTCAAGA TCGGCTCCTC GAAGGGCTCG
CAATGGGTGG TGCTGGACGG CCTGAAAACA GGTGAACAGG TCATGGTGGA TGGCTTCCAG
AAACTGCAGC CCGGCGCATT GGTCAAGCCT GTGCCGTGGC AGCCGCCGGG TGCCAATCCG
GCTGGCGCGG CTTCTGCTCC GGCTGCTGCG GCATCGTCGG CGGGCGCTGC CCAACCGGCG
GCATCGGCTG CATCCGCAGC CGCGACGAAA TAA
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| Protein sequence | MPMSRVAQSS QSYFPRHFMG LRPLALIAAV SLLLAGCGKS GNAQGGGSPP PPQVGVVTVT
QGDVALVTEL PGRLEASRVA QVRARAAGIL QKRLFREGSD VKAGQPLFSI DPAPYAAAAA
SAKASQARAE ANLAQATALA ERYKPLVEAN AISKQEYANA VAAQRQAEAD VAMGKASVQT
ANINLGYAAV TAPISGRIGR ALVTEGALVG QGDATQLAVI QQINPMYVNF TQSASEVMKL
RAAMESGQFK RASGGDAASV RIVLEDGTEY PRPGRLLFSD QTVDATTGQI TLRAEVPNPG
SQLLPGLYVR VRLEQAQAAN AITLPQQAVT RTAQGDTVMV VGADGKVASR TVKIGSSKGS
QWVVLDGLKT GEQVMVDGFQ KLQPGALVKP VPWQPPGANP AGAASAPAAA ASSAGAAQPA
ASAASAAATK
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