| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0560 |
|---|
| Symbol | |
|---|
| ID | 4010983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 559565 |
|---|
| End bp | 560542 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637940242 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_547418 |
|---|
| Protein GI | 91786466 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAC GTCATTTCAT CCAGGCAACC GGCGCAGGCG CCGCAGTGCT GGCCCTGCCT
GCGCTGCGCG CGCAAAGCTG GCCCTCGGGG CCCATCCGCA TCGTCGTTGG TTTTCCGCCC
GGCGGCGGGG CCGATGCGCT GGCCCGCGTG GTGGGCCTGA AACTCAGCGC CCTGTGGAAC
CAGCCCGTCG TCATCGAAAA CAAGGCCGGT GCGTCCGGTA CCCTGGCTGC CGAATACGTG
GCCCAGCAGG CGAGCGACGG CACCACCTTG CTGCTGACCA CCATCAACAG CCATGCCCTG
GCGCCCGCCG TGCTGCCAAA GCTGCGCTAC CACCCGGAGC GCGACTTCGT GCCGGTGGCG
CTGCTGGGCC TGACGCCCAA CCTGCTGATC GCCGGGGCCG TCCAGCCGGC CAGGACCGTG
AAGGACCTGG TGGCCTTGTG CAAAGCCAAA CCGGGCGTGG TCACCTTTGG CTCGGCCGGG
CCTGGCACCG CCCAGCACTT CGCGCTGGAG CTGTTCAAGC TGCGCGCCAG GGTCGATGCG
CTCCACGTGC CCTACAAAGG CAGCGGGCCG CTGTTGACCG ACCTGGTCGG CGGGCAGATC
CAGTACAGCT TTGAAACGAT GACGGCCGCG ACGCCCCACG TCAAGAGCGG GCGCGCCATC
GCGGTGGCAC AAACCCGCAG CAAGCGCGTG AAGGCCTATC CCGATGTGCC CACCATGCAG
GAGCAGGGCT TTGCCGGCTT TGAAACCTTC AACTGGTACG GCATTTCCGG CTCAGGCAAG
CTGCCGGCGC CCATCGCGTC GCGCATGAAC AAGGACATCA ACACCGTGCT GGCCATGGCC
GACGTGCGGG AGAAGTTCGA TGCTTTCGGT GTGGAGGACG GCGGCGGGTC ACCGGAGAAA
TTTGCCGAGC TGGTGCGAAG TGAAATCGCC AAATGGGCCA AGGTGGCCCA GGAGGCCAAC
GTACGGGTCG ACGGCTGA
|
|---|
| Protein sequence | MQRRHFIQAT GAGAAVLALP ALRAQSWPSG PIRIVVGFPP GGGADALARV VGLKLSALWN
QPVVIENKAG ASGTLAAEYV AQQASDGTTL LLTTINSHAL APAVLPKLRY HPERDFVPVA
LLGLTPNLLI AGAVQPARTV KDLVALCKAK PGVVTFGSAG PGTAQHFALE LFKLRARVDA
LHVPYKGSGP LLTDLVGGQI QYSFETMTAA TPHVKSGRAI AVAQTRSKRV KAYPDVPTMQ
EQGFAGFETF NWYGISGSGK LPAPIASRMN KDINTVLAMA DVREKFDAFG VEDGGGSPEK
FAELVRSEIA KWAKVAQEAN VRVDG
|
|---|
| |