| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4753 |
|---|
| Symbol | |
|---|
| ID | 3972729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5319235 |
|---|
| End bp | 5319684 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637927865 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_534594 |
|---|
| Protein GI | 90426224 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02801] TolR protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATGA ATTCGGCGGG ATCGGGAGGC GGCGGCGGAC GGCGCGGCCG GCGTCGCGCC
GGGGTCATGG CCGAGATCAA CGTGACGCCG ATGGTCGACG TCATGCTGGT GCTGCTGATC
ATCTTCATGG TGTCGGCGCC GATGCTCACC GTGGGGGTGC CGCTGGATCT GCCGCAGACC
CAGGCCAAGA GCCTCGACCA GGACAAGAAT CCGCTGACGC TGTCGGTTAA TTTGAAGGGC
CAAGTATACC TCAACGAGAC CGAGATCGGA CTCGAAGAGC TGGTGCCGAA GCTGAAGGCG
ATCACCGAAG CGCGCAGCGG TCTGGACGAG CGGATCTTCG TGCGCGGCGA CAAGAAGGTG
GACTACGGCA CGGTGATGAA GGTGATGGGC CGGCTGTCGG CGGCCGGGTT CCGGCGGGTG
GCGCTGGTGA CCGAAGTGGA TCAGGGATAG
|
|---|
| Protein sequence | MGMNSAGSGG GGGRRGRRRA GVMAEINVTP MVDVMLVLLI IFMVSAPMLT VGVPLDLPQT
QAKSLDQDKN PLTLSVNLKG QVYLNETEIG LEELVPKLKA ITEARSGLDE RIFVRGDKKV
DYGTVMKVMG RLSAAGFRRV ALVTEVDQG
|
|---|
| |