Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4664 |
Symbol | |
ID | 3972350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5216824 |
End bp | 5219607 |
Gene Length | 2784 bp |
Protein Length | 927 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927776 |
Product | ABC transporter related |
Protein accession | YP_534505 |
Protein GI | 90426135 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.113948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGC CCGCGGGTCC GGCCGCGGCG CCCGTGGTGC GGCTGCAAGG CGTCGGGCTG CGTTATGGCA AAGCTGTGGC ACTCGACGAC GTCACGCTGG ACCTGCCGGC GGGCTGCATG ATCGGGCTGA TCGGCCCGGA CGGCGTCGGC AAGTCGAGTC TGCTGTCGCT GATCGCCGGC GCCCGCGCCG TGCAGCAGGG TCATGTCGTG GTGTTCGGCG GCCAGATGTC GGACCCCACC CATCGGCGGC TCGCCTGTCC GCGGATCGCC TACATGCCGC AGGGGCTCGG CAAGAATCTC TACCCGACGC TGTCGGTGTT CGAGAACGTC GACTTCTTCG GCCGGCTGTT CGGCCAGGGC GCGCGCGAGC GGGCGCGGCG GATCGGGCAG TTGTTGCAGG ACACCGGGCT GGCGCCGTTC GCGAACCGCC CGGCGGGCAA ACTCTCCGGC GGCATGAAGC AGAAGCTCGG CCTGTGCTGC GCGCTGATCC ACGATCCCGA TCTGTTGATT CTCGACGAGC CGACCACCGG CGTCGATCCT TTGTCGCGGC GGCAGTTCTG GGAACTGATC GACGACATCC GCGGCCATCG TCCCGGCATG AGCGTGATCG TCGCCACCGC CTATATGGAA GAGGCGGCGC GGTTCGACCA TCTGGTGGCG ATGAATGCCG GCAAAGTGCT GGCGGCCGGC TCTCCCGCCG AACTGCTACA AAAGACCGGC GCGGCGACGC TGGACGCCGC CTTCATCGCG CTGTTGCCGG AGGCCGAACG CCGCGGCTAT CGCGAGGTGG TGATTCCGCC GCGCGTAGCT GCGGGCGTCG ACGACGTCGC CATCGAGGCC GAGCATCTCA CCATGCGGTT CGACGATTTC ACCGCGGTCG ACGACGTCTC GTTCCGGATC GGGCGCGGCG AAATCTTCGG CTTCCTCGGC TCCAACGGCT GCGGCAAGAC CACCACGATG AAGATGCTGA CCGGATTGCT GGCGGCGAGC CAGGGCAAGG CCCGGCTGTT CGGCAACGAG GTCGATCCCA ACGACATGGC GGTACGCCGC CGCGTCGGCT ACATGTCGCA GGCATTCTCG CTGTATTCCG AACTCACCGT GCGGCAGAAT CTCGATCTGC ACGCCAGGCT GTTCAGCATG GCGCCGGCGG CGATTCCGGC ACGGATTGCC GAGATGGAGC AGCGCTTCGA TCTCGCCGAG GTGAGCGATC AACTGCCCGA TGCGTTGCCG CTCGGCATCC GGCAGCGGCT GTCGCTGGCG GTGGCGATGA TCCACTCGCC GGATATTCTG ATTCTCGACG AGCCGACCTC CGGCGTCGAT CCGGTGGCGC GCGACGGGTT CTGGCAAATT CTCTCCGACC TGTCGCGCAA GGACAACGTC ACCATCTTCG TCTCGACCCA TTTCATGAAC GAGGCGGAGC GCTGCGACCG CATCTCGCTG ATGCATGCCG GGAAGGTGTT GATCAGCGAC ACCCCGCGCG CCATCGTGCA GCGGCGCAAC GCGCCCAATC TCGAAGACGC CTTCGTCGCC TATCTGGAGG ACGCGATCGG CCCAGCCTCT GCGGATGCGG CGCCGGCGAT CGCGTCGCAA CCGGCGGTCA CGACGGCCAG CGCGCCAGCA CTCGGCGACG TCGCGCCGCG CAAGCCGTCG CATCGCTGGT TCGATCCGCG GCGGATGTTC GCCTATACGC GGCGCGAGGC GCTGGAGTTG CGCCGCGATC CGATCCGCGC CACCATGGCG ATGCTCGGCA GCGTGCTGCT GATGTTCGTG CTCGGCTACG GCATCAATCT CGACGTCGAG AAGCTGTCGT TCGCGGCGCT CGACCGCGAC GATACCACGA TCAGCCGCGA CTACGTCCTG CAGATCGCCG GGTCGCGCTA TTTTCAGGAG CAACCGCCGA TCGCCGACTA CGCCGATCTC GATCGTCGGA TGCGCGGCGG CGAATTGACC TTGGCGATCG AGATTCCGCC CGGCTTCGGC CGTGACGTCG CCCGCGGCCG CAATGTCGAG ATCGGCGCCT GGATCGACGG CGCGATGCCG GCGCGGGCGG AGACCGCGCG CGGCTATGTG CAGGCCATGC ATCTGAGCTG GCTGACGCAG AAGGCGCGCG AACTGTACGG CGCCGCCGCG GTCGCCGGCA AGTTCCAGAT CGAGTTGCGC TACCGCTACA ACCCCGACAT CAAGAGCCTG GTGGCGATGG CGCCAGCGGT GATTCCGCTG CTGCTGCTGA TGATCCCGGC GATGCTGGCG GTGCTGAGCG TGGTGCGCGA AAAGGAGCTG GGCTCGATCA TCAACTTCTA CGCCACCCCG ACCACGCGGC TGGAATTCCT GATCGGCAAG CAAATTCCTT ACGTCGCGCT GGCGATGCTG AATTGCGTGC TGCTGACCGC CTTTGCGATT TTCGTGTTTC AGGTGCCGTT CACCGGCAGC TTCCTCACTT TGGCCTGCGG CACCTTCCTT TACGTCGTGA TCGCCACCGC GATCGGGCTG TTGCTGTCGA CCTTCATGAG CAGCCAGATC GCCGCCATTT TCGGTACCGC GCTGATCACC TTGATCCCCG CGATCCAGTT CTCCGGATTG ATCGACCCGG TGTCGTCGCT GCAGGGCTTC GGCGCTCTGA TCGGCCGGAT CTATCCCACC ACCTATTTCG TCAACATCAC CCGCGGCACC TTCTCCAAGG GCCTCGACTT CGTCGAGCTG TGGAATTCGT TCGTGCCGTT GCTGATCGCG GTGCCGCTAT TGCTCGGGCT CGGCGCGGCT CTTCTCAAGA AACAGGCGAA CTGA
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Protein sequence | MSEPAGPAAA PVVRLQGVGL RYGKAVALDD VTLDLPAGCM IGLIGPDGVG KSSLLSLIAG ARAVQQGHVV VFGGQMSDPT HRRLACPRIA YMPQGLGKNL YPTLSVFENV DFFGRLFGQG ARERARRIGQ LLQDTGLAPF ANRPAGKLSG GMKQKLGLCC ALIHDPDLLI LDEPTTGVDP LSRRQFWELI DDIRGHRPGM SVIVATAYME EAARFDHLVA MNAGKVLAAG SPAELLQKTG AATLDAAFIA LLPEAERRGY REVVIPPRVA AGVDDVAIEA EHLTMRFDDF TAVDDVSFRI GRGEIFGFLG SNGCGKTTTM KMLTGLLAAS QGKARLFGNE VDPNDMAVRR RVGYMSQAFS LYSELTVRQN LDLHARLFSM APAAIPARIA EMEQRFDLAE VSDQLPDALP LGIRQRLSLA VAMIHSPDIL ILDEPTSGVD PVARDGFWQI LSDLSRKDNV TIFVSTHFMN EAERCDRISL MHAGKVLISD TPRAIVQRRN APNLEDAFVA YLEDAIGPAS ADAAPAIASQ PAVTTASAPA LGDVAPRKPS HRWFDPRRMF AYTRREALEL RRDPIRATMA MLGSVLLMFV LGYGINLDVE KLSFAALDRD DTTISRDYVL QIAGSRYFQE QPPIADYADL DRRMRGGELT LAIEIPPGFG RDVARGRNVE IGAWIDGAMP ARAETARGYV QAMHLSWLTQ KARELYGAAA VAGKFQIELR YRYNPDIKSL VAMAPAVIPL LLLMIPAMLA VLSVVREKEL GSIINFYATP TTRLEFLIGK QIPYVALAML NCVLLTAFAI FVFQVPFTGS FLTLACGTFL YVVIATAIGL LLSTFMSSQI AAIFGTALIT LIPAIQFSGL IDPVSSLQGF GALIGRIYPT TYFVNITRGT FSKGLDFVEL WNSFVPLLIA VPLLLGLGAA LLKKQAN
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