Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4581 |
Symbol | |
ID | 3971880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5113962 |
End bp | 5114909 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637927692 |
Product | LysR family transcriptional regulator |
Protein accession | YP_534422 |
Protein GI | 90426052 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTATC TGATGGCGAT GCGCGCCTTC ATCCGCACCG TCGAGCTCGG CAGTTTTTCG CTGGCGGCGA CCGAACTCGA CGTCAAAGTG TCGACGATCT CGCGGCATAT CACCGCGCTT GAGAGCGACC TCGGCGCGGC GCTGCTCAAC CGCTCGACGC GGCGGCTGCA TCTGACCGAG GCCGGCACGC TGTTCTTCGA CCGCGCCACG CAGATCCTGC TCGCCGTGGA AGAGGCCCGG GCGGCGACCG CGTCGCTGAA CGAGAGCCCG CGCGGGGTGT TGCGGATCAG CATGCCGACC GCGTTCGGGC GGCTGCACGT AATGCCGCAT ATCAAGGATT TCGTCGCGGA GTATCCCGAG ATCCGCATCG CCGCCACGCT GACCGACGCG ACCGTGGACC TGATCGAGAC CGGCGACGAC GTCGCGGTCC GGATCGGTTC GCTCACCGAT TCCAGCCTGG TGGCGCGGCG GCTGGCGTCG CATCGCCGCA TCCTGGTCGC CAGTCCGGGC TTTCTGCGGC AGTGCGAACC AATCAGTCGT CCGCGCGATG TCGCGCGCCA GCAATGCCTG ATCTTCACCC TGCAATCCGG CGACTGCTGG TATGCGCGGC GCAGCGACGA TTCCAGCACA GAGCCGTTGC AGATCGCGGT GAGCGGCAAC ATGCGCGCCA ACGATTCCGA AGCTCTGCAG GGCGCGGCGC TGGCCGGGCT CGGCATCGCG CTGCTGCCGT CGTGGCTGGT CGGCGACGAT CTGCGCGCCG GGCGCCTGGT CGTGCCGTTG GCGGGCTGGG ATTGGTTCGC CGCGCGCGGT CCCGAGCCGG CGATCTGGGG TGTCTATCCG CCAAAGAAGA TCGTCTCGCC GAAGGTGCGA AGCTTCATCG ATTTTCTGGC GCGCCGATAC GGTAGTCCGG CCTATTGGGA TCGTCGGAGC GAGGCCGCGG TCGGCTGA
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Protein sequence | MDYLMAMRAF IRTVELGSFS LAATELDVKV STISRHITAL ESDLGAALLN RSTRRLHLTE AGTLFFDRAT QILLAVEEAR AATASLNESP RGVLRISMPT AFGRLHVMPH IKDFVAEYPE IRIAATLTDA TVDLIETGDD VAVRIGSLTD SSLVARRLAS HRRILVASPG FLRQCEPISR PRDVARQQCL IFTLQSGDCW YARRSDDSST EPLQIAVSGN MRANDSEALQ GAALAGLGIA LLPSWLVGDD LRAGRLVVPL AGWDWFAARG PEPAIWGVYP PKKIVSPKVR SFIDFLARRY GSPAYWDRRS EAAVG
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