| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4331 |
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| Symbol | |
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| ID | 3971519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4828873 |
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| End bp | 4829754 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637927440 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_534173 |
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| Protein GI | 90425803 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.388249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAG CGTTTCTCGC CAATCGCGGC GTGGTGAAGA TCAGCGGCGA GGATGCCCGG
CATTTTCTCA ACGGCCTCGT CACCACCGAC ATGACCAAGC TGACGCCAAG TCAAGGCCGG
TTCGGTGCGC TGCTGACGCC GCAGGGCAAG ATCGTCGCGG ATTTCTTCGT CACCGAACTT
CCCGCGGCCG ACGATGGCGG ATTCCTGCTC GACTGCCCGC GCGAGCTGGC GCAGCCGCTC
GCCGACAAGC TGAAATTCTA CAAGCTGCGC GCCAAAGTTC TGGTGGAAAA CCTCTCCGAC
CGGCTCGGCG TGCTGGCGAT CTGGGACGGC GAACTCACGA CGCTGCCGGA GGCGTGCTTC
GCCGATCCGC GCGATCCCAA GCTCGGCTGG CGCTGCCTGC TGCCGGTGGA ACTCGCCAAC
AAGACCGCCG AGTGGATCGG CGCGCCACTG GTCGACGCCG TGCTGTACGA CGCCCGTCGG
ATCAGCTGCG GCGCGCCGGC CGGCGGCGTC GATTTCCGCT ACGGCGACGC GTTTCCGCAC
GAAGCCAATA TGGACCGGCT GCACGGGGTG GATTTCGACA AGGGCTGCTA CGTCGGCCAG
GAAGTGGTGT CGCGGATGCA GCATCGCGGC ACCGCGCGCA CCCGCACCGT GCGCCTGGGG
TTCGACGGCG CGCAGCCTGA ACCGGGCAGC GAATTGCTGG CCGCTGACAA GCCGGTCGGT
CACCTCGGCT CGCTGGCCGA CGGCGTGGGT CTGGCGCTGG TGCGGATCGA TCGTCTGGCC
GAGGCGGTCG AAGCGGCGTC GGCCTTGAGC GCCGGCGGCG TCGCGGTGCG GCTGCTCGAT
CCGGTCGAGG CGCCGAAGGC GCCGACCCGG ACGCTGGCAT AG
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| Protein sequence | MKSAFLANRG VVKISGEDAR HFLNGLVTTD MTKLTPSQGR FGALLTPQGK IVADFFVTEL
PAADDGGFLL DCPRELAQPL ADKLKFYKLR AKVLVENLSD RLGVLAIWDG ELTTLPEACF
ADPRDPKLGW RCLLPVELAN KTAEWIGAPL VDAVLYDARR ISCGAPAGGV DFRYGDAFPH
EANMDRLHGV DFDKGCYVGQ EVVSRMQHRG TARTRTVRLG FDGAQPEPGS ELLAADKPVG
HLGSLADGVG LALVRIDRLA EAVEAASALS AGGVAVRLLD PVEAPKAPTR TLA
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