Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3469 |
Symbol | |
ID | 3971754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3853369 |
End bp | 3854145 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637926580 |
Product | TetR family transcriptional regulator |
Protein accession | YP_533328 |
Protein GI | 90424958 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGGT CGCAACAGAA GTCGGAGTCG GAACCCAACG GCCAGGAGGT GCGCAGTCGG GAGACCCGCG CGAAGATGAT CGAAGCGGCG ATCGAGCTGT TTGCGACGGT CGGCTACGAG GCCGCGAGCA CCCGCGCCCT TGCGGAGCAG GCCGGAGTTA ATCAGGCCGC GATCCCCTAC CATTTCGGCG GCAAGCGCGA ACTGTACCTC GCCGCGGCGC AAACCCTGGC AGAGCACGCC CGCGAGCGGA TCGCGCCGAT CGTCGCGCAG CTTCGGCAAG CGCATCAGAC GGATCCTCGG AGCGTGGTGG AGGAGGCGCT GAGACGTGTT TTTCGACTGT TCGCCAGCGG TTCGGAATCC CTGGCCTGGG TGACGTTTGT CATTCGCTCC CAGTATGAGG CACTGGAAGG TTTTCGCATC ATCCATGAAG AACTCGCCCC GTTGGAACGC GAACTGAAAC GCGTCATCGG CGAGGCCACG GGAGAAACGG ACCAGCAACG GCTCGGCATG AAACTAACCG TGGCGCTGGC TCCGATTTTC AGCTTCCGCC CCCTTCAGCA ATTCAACCTC AGCGTCCTGG GTTGGGACAA GCCCGCGCCG CATCTGCTCG ACAAGTTCGA AACGGTCATC GTCGAAGCCG CCCTCCGCGA GCTCTTCACC GAGCTTCCGC AGGCCGTCGA TCTCGCGCGT GGCAGACGGG GGCCCGGTGA AAAAACACTG GCTGACAGAG CCAGCCCATC AACGAAAGGA AGACGCTCAT GTCCGATCAA AGCTTGA
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Protein sequence | MHRSQQKSES EPNGQEVRSR ETRAKMIEAA IELFATVGYE AASTRALAEQ AGVNQAAIPY HFGGKRELYL AAAQTLAEHA RERIAPIVAQ LRQAHQTDPR SVVEEALRRV FRLFASGSES LAWVTFVIRS QYEALEGFRI IHEELAPLER ELKRVIGEAT GETDQQRLGM KLTVALAPIF SFRPLQQFNL SVLGWDKPAP HLLDKFETVI VEAALRELFT ELPQAVDLAR GRRGPGEKTL ADRASPSTKG RRSCPIKA
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