Gene RPC_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3340 
Symbol 
ID3973450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3697350 
End bp3698771 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content66% 
IMG OID637926451 
Productmagnesium transporter 
Protein accessionYP_533201 
Protein GI90424831 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA ATGCTGACGA TGGCCGTGCC GCCGCCGACA TGTTGCTCGA GCGACTGCCG 
ATGCGCGACC AGGACGGCGA TATCCGTCCG GAGTTTGTCG CCGAAATCGC CCGCGCCATC
GCGGCCAAGG ACGATGGCTT TCTGCGCGAA ATCGTCGCCG AGTTGCACGA GGCCGATCTC
GGCGATCTGA TTGAAGCGCT GGAGACCGAC GAGCGCGTCA GCCTGGTCGA ACTGACCGGC
GCCGATTTCG ACTTCTCCGC ACTCAACGAA GTCGATGACG CGGTCCGCGA AGAAATCCTC
GAGGAGCTCG AGCCGCAGAC CGTCGCCGAA GGCGTGCGCG AGCTGGATTC CGACGACGCC
GTCGAGTTGC TGGAAGCGCT CGACGAGGAG GATCAGGACG AAATTCTCGA AAAGCTGCTG
CCTGCGGAAC GCGACGCGCT GGAACGCAGC CTGGACTATC CGGAAAACTC CGCCGGCCGG
CGGATGCAGA CCGAGTTCAT TGCGGTGCCG CTCGACTGGA CCGTTGGCCA CGCGATCGAC
CACATGCGGG AAACCCCCGA ACTGCCGGAG CGGTTCTACG AAATCTACGC CGTCGACGCC
GCCCAGCATT GGCACGGCGC GGTGGCGCTC GATGCGTTGC TGCGCTCGGG CCGGCAGGTG
CCGCTGGCCG ATCTGATCGA CGAGGACCGC CGCAAGGTCT CGGTGCTCGA CGATCAGGAG
GAGGTGGCGC GGCTGTTCGG CAAGTACAAT CTGGTCGCCG CTCCCGTAGT GGACGTCGAC
AACCGTCTGG TCGGCGTCAT CACCATCGAC GACGTGGTCG ACGTCATCGA GGAAGAAGCC
GAGGAAGACA TCAAGGCGCT GGGCGGCGTC GCGCGCGACG AAGAACTGTC CGACAACGTC
TGGACCATTG CCCGCGGTCG CTTCAACTGG CTGCTGGTCA ATCTCGCCAC CGCGTTTCTG
GCCTCGTCGG TGCTCGGCCT GTTCGAGGGG CAGTTGGAGA AAATGGTGGC GCTGGCGGTG
CTGGCGCCGA TCGTGGCGAG CCAGGGCGGC AACGCCGCGA CCCAAACCAT GACGGTGGCG
GTACGCGCGC TGGCGACCCG CGAATTGGGC GCCAGCAATG CCTATCGCAT CGTGATGCGC
GAGGCCCTGG TCGGTCTGGT CAACGGCATC GCCTTTGCCG TCATCACCGG AGTCGCGGCG
GTGGCCTGGT TCAAGATCCC CGGGCTCGGC GTGGTGATCG GGCTCGCCAT GCTGTGCAAT
CTGGTGGCCG GCGCCTTGGG GGGCATCCTG ATTCCGATGG TGCTGGAGCG GGTGCGCGCC
GACCCCGCGG TGGCGTCCGG CACCTTCGTC ACCACCATCA CCGACGTAGT CGGGTTCTTC
TCGTTCCTCG GCATCGCCAC GTTGTGGTTC GGCCTGAGTT AG
 
Protein sequence
MADNADDGRA AADMLLERLP MRDQDGDIRP EFVAEIARAI AAKDDGFLRE IVAELHEADL 
GDLIEALETD ERVSLVELTG ADFDFSALNE VDDAVREEIL EELEPQTVAE GVRELDSDDA
VELLEALDEE DQDEILEKLL PAERDALERS LDYPENSAGR RMQTEFIAVP LDWTVGHAID
HMRETPELPE RFYEIYAVDA AQHWHGAVAL DALLRSGRQV PLADLIDEDR RKVSVLDDQE
EVARLFGKYN LVAAPVVDVD NRLVGVITID DVVDVIEEEA EEDIKALGGV ARDEELSDNV
WTIARGRFNW LLVNLATAFL ASSVLGLFEG QLEKMVALAV LAPIVASQGG NAATQTMTVA
VRALATRELG ASNAYRIVMR EALVGLVNGI AFAVITGVAA VAWFKIPGLG VVIGLAMLCN
LVAGALGGIL IPMVLERVRA DPAVASGTFV TTITDVVGFF SFLGIATLWF GLS