Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3262 |
Symbol | |
ID | 3971774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3611155 |
End bp | 3612306 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637926373 |
Product | HflK protein |
Protein accession | YP_533123 |
Protein GI | 90424753 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.264682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.260183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATGGA AGAATCAAGG CGGCGGCCCC TGGGGTTCGG GGCCGAAGGG ACCGTGGGGC AGCGGCCCGC AATCGACTGG GCCGCGGCCG CCGGATCTTG AAGATCTGCT GCGGCGTGGT CAGGACCGGC TGCAGCAAAT GCTTCCCGGC GGGCATCTCA GCAGCATGGG CATCGCGCTG GTTCTGGTCG CGGCCCTGGC GGTCTGGGGT CTGTCCGGAT TCTTCCGCGT GCAGTCCGAA GAACTCGGCG TTGTACTGCG CTTCGGCAAG CACGTGCGCA CCGTGCAGCC CGGCCTGAAC TATCACCTGC CGTATCCGAT CGAGACCGTG CTGCTGCCCA AGGCGCTGCG CGTCTCCACC ATCAGTATCG GCATGACCTT GGTCAACGAT ACGGCACGGC GCGGCACAGC CATGCGCGAC GTTCCGGAAG AGAGCCTGAT GCTGACCGGC GACGAGAACA TCGTCGACGT CGATTTCACC GTGCTGTGGC GGATCAGCCC CGACGGCGTC GGCAACTACC TGTTCAACAT CCAGAACCCT GAAGGCACCG TCAAGGCGGT TGCCGAAAGC GCGATGCGCG AAGTGGTCGG CCGCGCCAGC ATTCAGCCGA TCCTGACCGG CGCACGCACC ACCACCGAAG CCAGCGTGCA GGACCTCATG CAGAAGACGC TGGACGGCTA CGGCGCCGGC ATTCTGGTGC AGCAGGTGCA GATGCAGAAG GTCGATCCGC CGGCGCAGGT GATCGACGCG TTCCGCGACG TGCAGGCGGC CCGCGCCGAT CTCGAGCGGT TGCAGAACGA AGCCCAGACC TACGCCAATC GCGTGATCCC GGATGCGCGC GGGCGCGCCT CGCAGATCCT TCAGGTCGCC GAGGGCTACA AGGAGCAGGC GGTTGCCGAG GCCAAGGGCC AGAGCGCGCG CTTTCTCAAA GTCTATGATG AGTACAGGAA GGCTCCCGAC GTGACCCGTC AGCGCATCTA TCTCGAAACC ATGGAACGGA TTCTCGGCGG CGCCGACAAG CTGGTCTATG ACGGCGGCGG CGCGGGGTCG CAGGGCATCG TGCCGTACTT GCCGCTGAGC GAGTTGTCGT CGCGGCGTCC GCCCGCAGCC ACACCGGGCC AGCCGCAACA GCAGAGCGGG AGCATCCGAT GA
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Protein sequence | MPWKNQGGGP WGSGPKGPWG SGPQSTGPRP PDLEDLLRRG QDRLQQMLPG GHLSSMGIAL VLVAALAVWG LSGFFRVQSE ELGVVLRFGK HVRTVQPGLN YHLPYPIETV LLPKALRVST ISIGMTLVND TARRGTAMRD VPEESLMLTG DENIVDVDFT VLWRISPDGV GNYLFNIQNP EGTVKAVAES AMREVVGRAS IQPILTGART TTEASVQDLM QKTLDGYGAG ILVQQVQMQK VDPPAQVIDA FRDVQAARAD LERLQNEAQT YANRVIPDAR GRASQILQVA EGYKEQAVAE AKGQSARFLK VYDEYRKAPD VTRQRIYLET MERILGGADK LVYDGGGAGS QGIVPYLPLS ELSSRRPPAA TPGQPQQQSG SIR
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