Gene RPC_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2940 
Symbol 
ID3969997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3215888 
End bp3216562 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID637926051 
Productmethyltransferase type 11 
Protein accessionYP_532804 
Protein GI90424434 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACCGG ACGACTGCGA CGTTGGGTCC TCCCGGGTCT TGCACTATTG TGCGGACATG 
AGAGCGCACG ACCTCAAGCG ACTGGTCGCG GACGGCTACG ACAAAATAGC TGACGCTTAC
TTCGAGCAGT TTGCTCGATC GTCGGTGCGC GCCGCAAAGC TCGCGGAGCT GATCGCACGG
CTCGCCGAAA CAGCGAGGGT GCTCGATCTC GGATGCGGAG CCGGCGTGCC CGTGGCGCGC
GACTGCGCCG CGCGCGGCTT TCGGGTCACC GGCGTCGACG CCTCGCCGGA ACAGATTGCG
CGCGCCCGGT GCAACGTCCC CGAGGCCGAA TTCATCCACG CCGATATGAC CGCTGTAAGC
TTCGCAGCCG AGACATTCGA CGCCGTCGCC GCCTTCTACG CGATCACGCA CGTCCCAAGG
AATGAGCACG CCGCGCTGAT CCGACGGATC GCGTCGTGGT TGCGCCCCGG TGGGGTGTTG
GTCGCGAGTT TCGGAGCCTC GGAGGGAGAA TGGCTCGGAG ACTGGCTGGG CGCCCCGATG
TTCTTCAGTC ATCACGCCCC GGAAGAGGCG GAGCGACTGA TCCGGGACGC CGGCTTGTGT
CTGGAGCAGG CAGAGTTGCT CGAACAGGAC AACGAAACCG CGACGTTCCT CTGGATCACG
GCGCGAAAGC CCTGA
 
Protein sequence
MLPDDCDVGS SRVLHYCADM RAHDLKRLVA DGYDKIADAY FEQFARSSVR AAKLAELIAR 
LAETARVLDL GCGAGVPVAR DCAARGFRVT GVDASPEQIA RARCNVPEAE FIHADMTAVS
FAAETFDAVA AFYAITHVPR NEHAALIRRI ASWLRPGGVL VASFGASEGE WLGDWLGAPM
FFSHHAPEEA ERLIRDAGLC LEQAELLEQD NETATFLWIT ARKP