Gene RPC_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2020 
Symbol 
ID3973920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2203497 
End bp2204462 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content56% 
IMG OID637925129 
Producthypothetical protein 
Protein accessionYP_531894 
Protein GI90423524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.252549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAT TGAGCGCGGC AAGAGAACGA TGGCACTCCT CCTGGGGCTC CGCAGCCGTA 
ACGACCATGC TGTTTCTGAT CGTCTGCCTG AGTTGGGGGA CCACCTGGCT CGGCATCAAG
ATCGCGGTCG AAACCGTTCC GCCGATCACA TCGGCGGGGC TGCGCTTTCT CATCGCCTTC
CCGTTGTTTC TGAGTTTCGC ATGGTTGCGC GGCGATCCTA TTCTTTTCCC CAAAGGTATG
TCGTCGTTCT TCATCTTCGT CACGCTCTTT TATTTCTGCG TTCCGTATTG GCTGTTGAAC
TACGGCGAAC AATACGTCTC GTCCGGGCTG ACGGCGCTGT TATTCAGTAC GATGCCTGTC
TTCATTCTAG TGCTGTCCGC GTTCCTGCTT GAGGAACGCG TGCTCGTCTC GCAACTGATA
GGAATGATCG TCGGATGCAT GGGGCTTGCA CTGATCATCA ATTCTCAAGG CCAGGAGCTG
GACTATACGA GATTCCTCGG CGTGCTCGCC ATTTTGGTCG CAGCCGGCAT GCACGCCTTG
GCATATGTAA TTACGAAACG CGTGGGTGGC AACATCGGCG TGGTCACCTT CAATGCGCTC
CCGATCGCCA TTGCCGGTGT ATTCATGACC GCCGCCGGCG TGGTGATTGA GCACCCGCAG
CTGACGGCGA TTTCATCCCG TTCCTTGCTC GCCTTGATCT ATCTTGGGCT GGTGGCCTCG
GTCGGCGGCT TCATCGTGTA CTTCTTCCTG CTTAAACGGA TGAGTCCGAT CATTCTGTCG
TTCGTCTTCA TCATTTTCCC GGTCTTCGCC GTGGTGATCG GCGCCTGGTA CGAAGGATTG
CCGATGGCGT CCGACTTTCT GCTGAATATG GCGGTCGTGC TGGGAGGCTT TGCAATCACC
AAATTTCCGA TTGAGCCGCT GTTGCGAAAG GCAACAAAAG GGATGCGCCA TGACCGCGCT
GAATGA
 
Protein sequence
MTTLSAARER WHSSWGSAAV TTMLFLIVCL SWGTTWLGIK IAVETVPPIT SAGLRFLIAF 
PLFLSFAWLR GDPILFPKGM SSFFIFVTLF YFCVPYWLLN YGEQYVSSGL TALLFSTMPV
FILVLSAFLL EERVLVSQLI GMIVGCMGLA LIINSQGQEL DYTRFLGVLA ILVAAGMHAL
AYVITKRVGG NIGVVTFNAL PIAIAGVFMT AAGVVIEHPQ LTAISSRSLL ALIYLGLVAS
VGGFIVYFFL LKRMSPIILS FVFIIFPVFA VVIGAWYEGL PMASDFLLNM AVVLGGFAIT
KFPIEPLLRK ATKGMRHDRA E