Gene RPC_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1407 
Symbol 
ID3973058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1534413 
End bp1534913 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content62% 
IMG OID637924522 
Producthypothetical protein 
Protein accessionYP_531288 
Protein GI90422918 
COG category[S] Function unknown 
COG ID[COG5465] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.246502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGC TCGAAGGCGT CATCGATTCC GGGAACAACC CGCTCGCGGT GGTCGAAGAT 
ATCGCCGCGA CGAACGACTG GTCGTTCGAG CGCTCCGGCG AAGACGAGAT TACCATTGTC
TCCAAGGGCA ACTGGACCGA CTATCAACTC TCCTTCACCT GGATGAACGA GATCGAGGCG
CTGCATCTGG CCTGCGCCTT CGATATGAAG ATCCCCTCCG CGCACCGCCC CGAAGTGCAA
AGGCTGATCG CCGCGATCAA CGAGCAATTG TGGATCGGGC ATTTCGATAT CTGGACCCAC
ACCGGCATGA TCATGTACCG TCAGGCGCTG GTGCTGCCGG GCGGGTTGTC GGCCACCACC
GCGCAATGCG AGTCGATGCT GGTCAGCGCG ATCCACGCCT GCGAGCGCTA CTACCCGGCG
TTTCAGTTCG TGGTGTGGGC CGGCAAGTCG GCCGCCGAGG CGATGACCGC GGCGATGTTC
GACACCATGG GCGAAGCATA A
 
Protein sequence
MPMLEGVIDS GNNPLAVVED IAATNDWSFE RSGEDEITIV SKGNWTDYQL SFTWMNEIEA 
LHLACAFDMK IPSAHRPEVQ RLIAAINEQL WIGHFDIWTH TGMIMYRQAL VLPGGLSATT
AQCESMLVSA IHACERYYPA FQFVVWAGKS AAEAMTAAMF DTMGEA