Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0841 |
Symbol | |
ID | 3969838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 927590 |
End bp | 928519 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923957 |
Product | LysR family transcriptional regulator |
Protein accession | YP_530730 |
Protein GI | 90422360 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.697299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.209982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCA AGCAGATGCA GTATTTCCTC TGCCTGGCGC AGGAGGGCAA CGTCACCCGC GCGGCGCGGC AGCTCAACAT CGTGCAGCCG GCGCTCAGCA TGCAGATCGC CAAGCTGGAA AAATCCGTCG GCAAGCAGTT GTTCTATCGC CAGGCGCACG GCGTGGCGCT GACCGCGGCG GGCGAAACGC TGGTCAAACT CGCCGGCTCG ATCATGCAGA ACATCGACCA CGCCCGCGAG GAGATGGCGC GGCTCGACGG CACGATCTCC GGCCGGGTCT CGATCGGCAT GATCACCTCG GCGGCGCAGA GCACGCTCGC CGCCTCGTCG GCGAAGATCG CGGCACGCTA TCCGGAGATC CAGCTTCTGG TCTGCGAGGG CTATACCGAG ATGCTGCTGG ACTGGGTCGC CGCCGGCCAG CTCGACATCG CCATCGTCAA CATGCCGCCC GGCAAATCGA CGCTCACCGC GCATCACATC CTCGACGAGC AGATGATGCT GGCGCGACGG CCCGGCAGCG CGCTGGTGCT GCCCGCGATC GTGCCCTATG CGCGGCTGAA GGACATCGAC ATCGTGATCC CATCGCGGCG CCATGGGTTG CGCCGCATCC TCGACGCCGC CGCCGCTGAA GCGGATTTCA GCCTGAAGCC GCGGCTGGAG ATCGATACGC TGTCGGCGAT CTGCGAGGTG GTGGCGACCA CCGACCTTGT GACCGTGCTG CCCGGCATCG CGCTGCACGC AGCGCTCGCG CAAGGCCGGC TGCAGGCGCA TCGCCTGAAA AAGCCGGCGA TCTCGCGCGC CGTCGTTTGG ACCACCCATC CGCGCCGGAT CGTCTCGGCG GCGATGACCG CGGTGATGGA GATCATCTCC GCGGATCTGT TGGCGGCGGC GAAACAAGCC TCGCGGCTGA CTTTCACAGC ACCGCGATGA
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Protein sequence | MDFKQMQYFL CLAQEGNVTR AARQLNIVQP ALSMQIAKLE KSVGKQLFYR QAHGVALTAA GETLVKLAGS IMQNIDHARE EMARLDGTIS GRVSIGMITS AAQSTLAASS AKIAARYPEI QLLVCEGYTE MLLDWVAAGQ LDIAIVNMPP GKSTLTAHHI LDEQMMLARR PGSALVLPAI VPYARLKDID IVIPSRRHGL RRILDAAAAE ADFSLKPRLE IDTLSAICEV VATTDLVTVL PGIALHAALA QGRLQAHRLK KPAISRAVVW TTHPRRIVSA AMTAVMEIIS ADLLAAAKQA SRLTFTAPR
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