Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0539 |
Symbol | |
ID | 3970780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 581552 |
End bp | 582052 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637923655 |
Product | hypothetical protein |
Protein accession | YP_530433 |
Protein GI | 90422063 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.341232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGA GTTCAAAGTT CCGCCCCCCG TCGAATACGG CTTCGATCGC GTCGCCGTGC TACGAAGACG ATGTCTACGG CTGGGTCGAA CACCAAGTCG CGCTGTTGAA GGCCGGTCGG CTGTCCGAGA TCGATGCTGA CAACATTGCC GAGGAGTTGT CCGACGTGGG CGGCGAGCAA TACGACAAGC TGGAAAGCGC GATTCGCGTT GTGCTGTTGC ATCTTTTGAA GTGGGATCAA CAGCCGACGC ACCGCTCCAG AAGCTGGGTA TTTTCGATCC GAACTCAGCG CCGACATATT GCCCGGGTGC TGATGAAGAA TCCCAGCCTC AAGCCGCATA TCGCAGAAGC GATCGGTGAA GCTTACGTTG ATGCCCGTGA CGAAGCTCAA CAGGAAACCG GGCTTCCGGC GAAAGTTTTC GGCTCGATCT GTCCCTATGA TTGGGAAGCG ATCCTGACGC GTGCCGTTGA GTTTGATGAC GTGCGCTCAC CGGAAGAGTA A
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Protein sequence | MTTSSKFRPP SNTASIASPC YEDDVYGWVE HQVALLKAGR LSEIDADNIA EELSDVGGEQ YDKLESAIRV VLLHLLKWDQ QPTHRSRSWV FSIRTQRRHI ARVLMKNPSL KPHIAEAIGE AYVDARDEAQ QETGLPAKVF GSICPYDWEA ILTRAVEFDD VRSPEE
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