Gene RPC_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0539 
Symbol 
ID3970780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp581552 
End bp582052 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID637923655 
Producthypothetical protein 
Protein accessionYP_530433 
Protein GI90422063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.341232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA GTTCAAAGTT CCGCCCCCCG TCGAATACGG CTTCGATCGC GTCGCCGTGC 
TACGAAGACG ATGTCTACGG CTGGGTCGAA CACCAAGTCG CGCTGTTGAA GGCCGGTCGG
CTGTCCGAGA TCGATGCTGA CAACATTGCC GAGGAGTTGT CCGACGTGGG CGGCGAGCAA
TACGACAAGC TGGAAAGCGC GATTCGCGTT GTGCTGTTGC ATCTTTTGAA GTGGGATCAA
CAGCCGACGC ACCGCTCCAG AAGCTGGGTA TTTTCGATCC GAACTCAGCG CCGACATATT
GCCCGGGTGC TGATGAAGAA TCCCAGCCTC AAGCCGCATA TCGCAGAAGC GATCGGTGAA
GCTTACGTTG ATGCCCGTGA CGAAGCTCAA CAGGAAACCG GGCTTCCGGC GAAAGTTTTC
GGCTCGATCT GTCCCTATGA TTGGGAAGCG ATCCTGACGC GTGCCGTTGA GTTTGATGAC
GTGCGCTCAC CGGAAGAGTA A
 
Protein sequence
MTTSSKFRPP SNTASIASPC YEDDVYGWVE HQVALLKAGR LSEIDADNIA EELSDVGGEQ 
YDKLESAIRV VLLHLLKWDQ QPTHRSRSWV FSIRTQRRHI ARVLMKNPSL KPHIAEAIGE
AYVDARDEAQ QETGLPAKVF GSICPYDWEA ILTRAVEFDD VRSPEE