| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0490 |
|---|
| Symbol | |
|---|
| ID | 3970252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 529465 |
|---|
| End bp | 530412 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637923606 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_530384 |
|---|
| Protein GI | 90422014 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.044481 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCAC AGCAACCGAG CGCGGGTCAA GCCGCGCGCC CGCTCAGCGT CGGCGCGATC
GCGCTAGTTA TGTTGTGCTG CCTGTCCTGG GGCTTCAACC AGATCGCGAT CAAGCTGGTG
CTACCGGAGG TTCCGCCGTT CCTGCAGGCG ACGATCCGCT CGCTCGGCGC GCTGCTGGTG
ATCGGGCTGA TCGCGCAAGC CCGCGGCGTG AAGCTGTGGC AGCGCGACGG CGCCTGGCGC
GCCGGGCTGT TCGCCGGCGT GCTGTTCGGC ATCGAATTCG TGCTGATCTA TCGCGGCCTG
ATGCTGACCA CGGCGTCGCG CGCCGTGGTG TTTCTCTACA CCGCGCCGTT CTTCGTGGCG
TTCGGCGCCT ACCAGCTGCT GCATGAGCGG CTGAACCGGC TGCAATGGGG CGGGCTGGCG
CTGAGCTTCG TCGGCGTGGC GCTGGCGATC GGGGTGCCGC AGCCCAATGT CGATGCCGGC
GTGCTGCTCG GCGATCTGAT GATGATCGGC GGCGGCGCGC TGTGGGCCGC CACCACGCTG
ATCGTCAAGA CGACGCGGCT CGGCCGGGTG CCGGCGGAAA AGGGCCTCGG CTATCAGGTC
GCGGTGTCGA TCCCGATCCT GGCGCTGGCG GCCTGGCTGT CCGGCGAAAC CGTGCCGCAA
TGGCCCACGC CGCTGTCGCT GGCGCTGATG GCCTATCAGG CGGTCTGGGT GGTCGGGCTG
ACCTTCCTGT TGTGGTTCGG CCTGGTGAAG ACCTATTCGG CCAGCAAATT GTCGTCCTTC
ACCTTCATCA CCCCGCTGTT CGGCGTCGCC GCGGGTTATC TGATCATGGA CGATCCCTTG
ACGCCGACCT TCGGCGTCGC CGCGCTCTTG GTGACCGCCG GGCTCTATCT GGTCAATCGG
CCGGCACCGC GGGCCGAGCC GGCGGCTCGG CCCGACCGAA CGGCCTGA
|
|---|
| Protein sequence | MPSQQPSAGQ AARPLSVGAI ALVMLCCLSW GFNQIAIKLV LPEVPPFLQA TIRSLGALLV
IGLIAQARGV KLWQRDGAWR AGLFAGVLFG IEFVLIYRGL MLTTASRAVV FLYTAPFFVA
FGAYQLLHER LNRLQWGGLA LSFVGVALAI GVPQPNVDAG VLLGDLMMIG GGALWAATTL
IVKTTRLGRV PAEKGLGYQV AVSIPILALA AWLSGETVPQ WPTPLSLALM AYQAVWVVGL
TFLLWFGLVK TYSASKLSSF TFITPLFGVA AGYLIMDDPL TPTFGVAALL VTAGLYLVNR
PAPRAEPAAR PDRTA
|
|---|
| |