Gene RPC_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0463 
Symbol 
ID3970225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp501258 
End bp501824 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content65% 
IMG OID637923579 
Productnitrogen-fixing NifU-like 
Protein accessionYP_530357 
Protein GI90421987 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATTC AGACCGAACC CACGCCGAAC CCCGCCACCC TGAAGTTCAT CCCCGGCCGC 
GTCGTGCTCG ACAGCGGCAC CATGGAATTC AACGACCGTG CCACCGCGGC GCGCTCGCCT
CTGGCGGAGC GGATCTTCGA GGTGCCGGGC GTTACCGGGG TGTTCTACGG CTCGGATTTC
GTCACCGTGA CCAAGGACGA CAGCGACTGG CAGCACCTCA AGCCCTCGAT CTTGGGCGCC
ATCATGGAAC ATTACATGTC CGGCGAGCCG CTGATGGCCG ACGGCCGGGT CGACGGCGAC
GAGCCCTCGG AGGACGACGA GTTCTTCGAC AAGGCCGACG CCGAAACCGT CGACATGATC
AAGGATCTGA TCGAGACCCG GGTGCGCCCG GCGGTCGCCA ATGACGGCGG CGACATCACC
TTCCGCGGCT TCAAGGACGG CATCGTCTAT CTGAAGATGC AGGGCGCCTG CTCGGGCTGT
CCGTCGTCCA CCGCGACGCT GCAGCACGGC ATCCAGAACC TGTTGAAGCA CTTCGTGCCG
GCCGTGGTCG AGGTGCGGCC GATCTGA
 
Protein sequence
MFIQTEPTPN PATLKFIPGR VVLDSGTMEF NDRATAARSP LAERIFEVPG VTGVFYGSDF 
VTVTKDDSDW QHLKPSILGA IMEHYMSGEP LMADGRVDGD EPSEDDEFFD KADAETVDMI
KDLIETRVRP AVANDGGDIT FRGFKDGIVY LKMQGACSGC PSSTATLQHG IQNLLKHFVP
AVVEVRPI