| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3743 |
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| Symbol | |
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| ID | 3966778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4743025 |
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| End bp | 4743894 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637922840 |
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| Product | pirin |
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| Protein accession | YP_529210 |
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| Protein GI | 90023383 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC GCACCGTAGT AGAACAACTT CAAGGGCGCG CCACATCCGA TGGCGATGGC
GTAAAGCTAT TGCGCGTGTT TGGCGGCCCG CGACCAGAGC GCTTTGACCC TTTTTTAATG
CTTGACGAGT TCGGCTCGGA AGAAGCCTCC GACTATATTG GCGGCTTCCC ACCCCACCCG
CATAGGGGCT TCGAGACAGT TACTTATATG TTGCAGGGTA AAATGGAGCA CCGCGACCAC
ATGAAAAACG TGGGGTTGCT GGCCGATGGT GACGTGCAGT GGATGACCGC CGCCAAAGGC
ATAATTCACT CTGAAATGCC TAGGCAAACC GAAGGTAAAA TGCGCGGGTT TCAATTGTGG
GTAAATTTGC CCAGCAAAGC CAAAATGGGC CCAGCCCATT ACGATGATAT TGCTGCAGAT
CGTATCCCTG TGTACGAGCT TAATGGAGCA ACAGTCAAAG CCATTGCTGG TGCGACAGAA
GTAACAGATA ACGCCGCCAA AACCCATGCT ATAAAAGGTG TAACCCAAGT GGTAGACACC
GAGGTGCTAT ACCTAGATGT GCATTTGACT GAGGGCGCCA GCGTAAATAT ATCGCTGGCC
GATAGTCACA ACACATTGGT ATACACCTAC GATGGCACAG CGGCAATTGG CCCACAAAAT
ACACCGGCCC CAGCCCAAAC CGTAAGCCGC CTAAGCGAAG CCGGCAGCTT GCAACTAAGT
AACAGTGCCG CAGAAGTGAC GCGGGTGCTT GTAATAGCCG GCAAACCCCT GCGCGAACCG
ATAGTGCAAT ACGGCCCGTT TGTAATGAAC ACGCAGGAGG AGATCAATCA AGCGATTGCG
GATTATCAGG CGGGGGTGTT GACGGACTAG
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| Protein sequence | MSNRTVVEQL QGRATSDGDG VKLLRVFGGP RPERFDPFLM LDEFGSEEAS DYIGGFPPHP
HRGFETVTYM LQGKMEHRDH MKNVGLLADG DVQWMTAAKG IIHSEMPRQT EGKMRGFQLW
VNLPSKAKMG PAHYDDIAAD RIPVYELNGA TVKAIAGATE VTDNAAKTHA IKGVTQVVDT
EVLYLDVHLT EGASVNISLA DSHNTLVYTY DGTAAIGPQN TPAPAQTVSR LSEAGSLQLS
NSAAEVTRVL VIAGKPLREP IVQYGPFVMN TQEEINQAIA DYQAGVLTD
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