Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3726 |
Symbol | |
ID | 3966761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4722996 |
End bp | 4724756 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922823 |
Product | phytoene dehydrogenase and related proteins-like |
Protein accession | YP_529193 |
Protein GI | 90023366 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCAG CACACAAACA GCGTGAAACC ATGCTAATTA TAGGCGCGGG CTTAGGTGGC CTTTCCACCG GTTGCTACGC ACAAATGAAT GGCTATAAAA CGCACTTATT AGAAATGCAC GAGATACCCG GAGGATGTTG TACTTCGTGG GAAAAAGGAA AGTTCACTTT TGACTGGTGT GTAAGCTGGT TACTTGGCAG CGGGCCGGGC AACGAAATGT ACGACGTTTG GCGTGAAATT GGCGGGCTGG ATGGCAAACA AATTCGCCAC CCCGAAGTAT TTAATATTGT TACCACCGCC AGCGGTGACT CGGTGCGGTT TTATTCCGAC CCCGAAAAAC TCGAAAAACA TTTGTGCGAA ATATCCCCAG AGGATACAAA GCTTATAAAA AACTTTTGTA AAGGCTTGCG GCAGTTTATT AAGTGCTTAA AGGTTTACCC TTTTCTTAAA CCAGTAGGGT TAATGAAATG GCACGAAAAG GCCCGCATGC TCGCCTCGTT TATTCCACAC TTTAATTTAA TTCGCAAAAC AATATCGACC TTAATGACCG ACTATTCGGC AAACTTTAAA AGTCCAATAC TGCAAGAAGC GTTTAATTTT ATACTTTATG AAAAGCACCC TAACTTTCCG GTACTGCCTT TCTACTTTCA GCTCGCCTCC CATGCCACGC ATTCGGCAGG TGTGCCAGAG CACGGCTCAC TTGGGCTGGC CCGCTCTATA GAGGCACGCT TTCTCAAACT TGGCGGCAAG GTTAGTTACA ATACTAAGGT AGAAGAAATT CTAGTAGAGA ACAACACGGC TGTAGGTGTG CGCTTATCCA ACGGCGAAAA ATTGTTTGCC GATATTATTG TATCGGCCAG CGACGGTTAC AATACCGTTA TGCGTATGCT GAAGGGTAAA TACCTTAACG ATACCTACCG CAAGCTCTAT ACCGAATGTA TAACCAAACC CGATTTGGTG TTCCCCGGCT ATTTCACGTT GTTTCTAGGG TTGGAAAAGC ATTTTGCCGA AGGTGAGTAT TGCACCACTT ATATTCTACC CGAGGAACTG GCCGAGCAAT TAATTGGTAT CCGCCACGCA AGCATCAATG TGCAATTTCG CAACGCCCTC TACCCCGAAC TAAGCCCGCG AAATACCAGT ATTATTTACC TAAGTTATTT TTGCGATATA GCGCCCTGGC GCGAGCTAGC CGAAGGTGAA GAACAGGTGA GTCGCGATTT TAAAGGCGAG CACATTCACA CCCTGCCGGT TAAACGCGGC AGAGCTTATC AATTAGCAAA AAAACAAGTG GCCAATTTGC TTATCGACTT TTTAGAAAAA AAGTTCCCTG GCTTACGCAA TGCCATATCC ACACGCGATA TCGCCACCCC CCTCACTCAA GTTCGCTACA CAGGCAACTA CGATGGCTCG GTGTTGGGCT GGCAACCCTT TGTAGAAAGC GGTGAATCGC TGGAAGAAGA AGTAAAACGC AGTGGCCCGG GCCTACCGGG GTTACAGAAC TTTTATTTCT CGGGTGTGTG GGCCACTACT GGTGGTTTGA TACGTGCCGC TACCGCGGGT AGGCATGTAA TGCAATTTAT CTGCAAAGAC GATAACAAAG CTTTTAGCGC TTATGTAGAC CCCAAAGCCG TAGCGCCAAC CCATATAGTG CTGCGCGAAA AAACGCCTTT TAATCGTCAG TCTAAAAATA TCACACCCCC AATAACACCA TTGAGCAGCC GCGAAAATTC CGTTGCATCG CACGAAACCG AACCGGCTTA A
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Protein sequence | MQPAHKQRET MLIIGAGLGG LSTGCYAQMN GYKTHLLEMH EIPGGCCTSW EKGKFTFDWC VSWLLGSGPG NEMYDVWREI GGLDGKQIRH PEVFNIVTTA SGDSVRFYSD PEKLEKHLCE ISPEDTKLIK NFCKGLRQFI KCLKVYPFLK PVGLMKWHEK ARMLASFIPH FNLIRKTIST LMTDYSANFK SPILQEAFNF ILYEKHPNFP VLPFYFQLAS HATHSAGVPE HGSLGLARSI EARFLKLGGK VSYNTKVEEI LVENNTAVGV RLSNGEKLFA DIIVSASDGY NTVMRMLKGK YLNDTYRKLY TECITKPDLV FPGYFTLFLG LEKHFAEGEY CTTYILPEEL AEQLIGIRHA SINVQFRNAL YPELSPRNTS IIYLSYFCDI APWRELAEGE EQVSRDFKGE HIHTLPVKRG RAYQLAKKQV ANLLIDFLEK KFPGLRNAIS TRDIATPLTQ VRYTGNYDGS VLGWQPFVES GESLEEEVKR SGPGLPGLQN FYFSGVWATT GGLIRAATAG RHVMQFICKD DNKAFSAYVD PKAVAPTHIV LREKTPFNRQ SKNITPPITP LSSRENSVAS HETEPA
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